DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk8 and mec-4

DIOPT Version :10

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:694 Identity:128/694 - (18%)
Similarity:216/694 - (31%) Gaps:265/694 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EFCRNTTIHGLKYINNSKLRSSDRLFFGIALLVVLSLA----IYL-IQDAFDKWNTNPVIVGIDP 100
            |||..|:.||:..|.     .:..:::. |:.|||.|.    :|| .|...||:|.|..||.|..
 Worm    86 EFCYKTSAHGIPMIG-----EAPNVYYR-AVWVVLFLGCMIMLYLNAQSVLDKYNRNEKIVDIQL 144

  Fly   101 ELTSIANEPFPAVTICNLN---QALAERVE----------------------------------- 127
            :..:   .||||:|:||||   .:||..|:                                   
 Worm   145 KFDT---APFPAITLCNLNPYKASLATSVDLVKRTLSAFDGAMGKAGGNKDHEEEREVVTEPPTT 206

  Fly   128 --------------HFSNDSVEFAMLQLLC-----------RRKVDVELVKTN----------DS 157
                          ..|....|....:.||           ..:.:.||::|.          |.
 Worm   207 PAPTTKPARRRGKRDLSGAFFEPGFARCLCGSQGSSEQEDKDEEKEEELLETTTKKVFNINDADE 271

  Fly   158 RW---EEFI--------------LNISQPCNSMVIHCRFGADDYECARLFHPIVTDEGLCCVFN- 204
            .|   ||:.              :|:.:.|.|            |..:...|...|:...|.|: 
 Worm   272 EWDGMEEYDNEHYENYDVEATTGMNMMEECQS------------ERTKFDEPTGFDDRCICAFDR 324

  Fly   205 MLH---PRFM-------------------YRKRVPYSHRN--ISLPEGFHAVNWHAEL------G 239
            ..|   |.|:                   ...:....||:  |..|..| .|.::.:.      .
 Worm   325 STHDAWPCFLNGTWETTECDTCNEHAFCTKDNKTAKGHRSPCICAPSRF-CVAYNGKTPPIEIWT 388

  Fly   240 YRKRGFQPDGDNPLYPRRAQGTGESLG-----------------------LSLT----------- 270
            |.:.|...:..|.|.....||..:.:.                       ||.|           
 Worm   389 YLQGGTPTEDPNFLEAMGFQGMTDEVAIVTKAKENIMFAMATLSMQDRERLSTTKRELVHKCSFN 453

  Fly   271 ---LDVQAD------------------------------------------AYYCSSSSSIGFKI 290
               .|::||                                          :.|..::.:.|.::
 Worm   454 GKACDIEADFLTHIDPAFGSCFTFNHNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRL 518

  Fly   291 ALHSPNESPNVRETGVLLAPGMETK--LRIDPSKILTEKHLRNV-DRRSRRCLFHNELKLRWFAH 352
            .:|...:.|.....|.....|..:.  ||:.....|...:...| |.::...::.|       ..
 Worm   519 TIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDCVPDGKTSDYIYSN-------YE 576

  Fly   353 YTQRNCVAECLSGWLIRHCGC--VTFYMPRLNAN--DTICPLHKRECVELIRFRTIIAMES---- 409
            |:...|...|....:::.|.|  ..|.:|. ||.  |...|: .|:|:: .|...:..:..    
 Worm   577 YSVEGCYRSCFQQLVLKECRCGDPRFPVPE-NARHCDAADPI-ARKCLD-ARMNDLGGLHGSFRC 638

  Fly   410 -CLDECLPSCFDLSFSAIAY---STRISLDGFRETPSNGGWNFT----DAYVERSVAVVNMYFKD 466
             |...|..|.:.:::|...:   |.:|.|         |..|.|    :.:.:.:.|:|.::::.
 Worm   639 RCQQPCRQSIYSVTYSPAKWPSLSLQIQL---------GSCNGTAVECNKHYKENGAMVEVFYEQ 694

  Fly   467 PTFRANKQTEFIGFSDFLSGVGGLMGLFLGFSFLSIAECVYFAL 510
            ..|....::|..||.:.|:..||.:||:.|.|||:..|.|:..|
 Worm   695 LNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFVFLFL 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:459966 126/689 (18%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 127/690 (18%)

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