DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and scnn1d

DIOPT Version :9

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_031762206.1 Gene:scnn1d / 100496702 XenbaseID:XB-GENE-991876 Length:604 Species:Xenopus tropicalis


Alignment Length:573 Identity:114/573 - (19%)
Similarity:196/573 - (34%) Gaps:171/573 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FCRNTTIHGLKYINNSKLRSSDRLFFGIALLVVLSLAIYLIQDAFDKWNTNP--VIVGIDPELTS 104
            ||.||||||...:|.|:.......|:.:...|..::..:......|::...|  .|:|:..:   
 Frog    26 FCDNTTIHGTVRLNCSRENKMKTTFWLVLYFVAFAMMYWQFGQLTDQYWAYPTNTIIGLQSK--- 87

  Fly   105 IANEPFPAVTICNLNQALAERVEHFSN--DSVEFAMLQLLCRRKVDV-----ELVKTND------ 156
              .:.||||||||||....::|..:.|  |.:....|.||...:.:|     ::|...|      
 Frog    88 --GKIFPAVTICNLNPYRFDQVNMYINQLDQLAKETLYLLYEYEYEVPESPQQVVDLQDLLNNVT 150

  Fly   157 ----------------------------------------------------------SRWEEF- 162
                                                                      ..|.:| 
 Frog   151 GQFNGNFILDQSIVLQKLQENGSGPALPGQKKFKVGFKLCNSSGDCYYKWFWSGFDAVHEWYKFH 215

  Fly   163 ----------ILNISQP-CNSMVIHCRFG---ADDYECARLFHPIVTDEGLCCVFNMLHPRFMYR 213
                      :|||:.. ....::.|.|.   .|:.|.....|||.   |.|...|         
 Frog   216 YINIMSNIPAVLNIANNFSRDYILTCHFNEMPCDEREYVHFHHPIY---GNCFTIN--------- 268

  Fly   214 KRVPYSHRNISLPEGFHAVNWHAELGYRKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAY 278
                 :|             |.....|..|                 .|:..|||:.:.......
 Frog   269 -----NH-------------WKENSWYSSR-----------------PGKQYGLSIVVKTDLHDN 298

  Fly   279 YCSSSSSIGFKIALHSPNESPNVRETGVLLAPGMETKLRIDPSKILTEKHLRNVDRRSRRCLFHN 343
            ....|.:.|.:|.:|:||:.|.|...|..:.||.|..:.:...:.:      .:..:..:|....
 Frog   299 MPLLSQAAGARIMIHNPNQPPLVEHQGFDIRPGTENSISVKQEEAI------RLGGKYSQCTSDG 357

  Fly   344 E---LKLRWFAHYTQRNCVAECLSGWLIRHCGCVTFYMPRLNANDTICPLHKR--------ECVE 397
            .   :|:.:...||.:.|:..|....:|..|||..::.| |......|..:|.        :..|
 Frog   358 SDLGIKILYNTSYTMQACLNSCFQYKMIEVCGCGYYFYP-LPPGMEYCNYNKHPDWGYCFYQLYE 421

  Fly   398 LIRFRTIIAMESCLDECLPSCFDLSFSAIAYSTRIS----LDGFRETPSNGGWNFTDAYVERS-V 457
            .:...|:|....|..:|..:.:.||.....:.:.:|    |...:|.     :|.|.   :|| :
 Frog   422 KMLDHTLICFTQCPKQCKQTEYHLSAGTAKWPSPVSKAKKLLSLQER-----YNSTS---KRSDI 478

  Fly   458 AVVNMYFKDPTFRANKQTEFIGFSDFLSGVGGLMGLFLGFSFLSIAECVYFAL 510
            :.:|:|:::.::|:.::|..:..:..||.:|||...:.|.|.||:||.....|
 Frog   479 SKINVYYEELSYRSVEETPSVSVTMLLSSMGGLWSWWFGSSVLSVAEIAELVL 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:279230 113/569 (20%)
scnn1dXP_031762206.1 ENaC 18..583 CDD:273304 114/573 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.