DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk8 and asic4

DIOPT Version :9

Sequence 1:NP_001036260.3 Gene:ppk8 / 318213 FlyBaseID:FBgn0052792 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_031749131.1 Gene:asic4 / 100486325 XenbaseID:XB-GENE-940165 Length:535 Species:Xenopus tropicalis


Alignment Length:567 Identity:122/567 - (21%)
Similarity:214/567 - (37%) Gaps:118/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RNTDEFCRNTTIHGLKYINNSKLRSSDRLFFGIALLVVLSLAIYLIQDAFDKWNTNPVIVGIDPE 101
            |:...|...:|:|||::|..:......:..:.:|.|..|...:|.:......:..:|.:..:|.|
 Frog    39 RDLAAFASTSTLHGLRHIFQTGRLGIKQSLWALAFLASLLFFLYQVAKCALYYLEHPHVTAVDEE 103

  Fly   102 LTSIANEPFPAVTICNLNQALAERVEHFS-NDSVEFAMLQLLCRRKVDVELVKTNDSRWE----- 160
            :  :....|||:||||:|     |..|.: .|...:.:..|......|.|..:.:|..::     
 Frog   104 V--MGEMIFPAITICNIN-----RFRHSALTDPDIYHLANLTGLPPKDREGHRDSDLMYDDPDML 161

  Fly   161 EFILNISQPCNSMVIHCRFGADDYEC-ARLFHPIVTDEGLCCVFNMLHPRFMYRKRVPYSHRNIS 224
            :.:.........|:..|.|..|  .| |:.|..:.|..|.|..||.                   
 Frog   162 DIVNRTGHQLAEMLKSCNFSGD--SCSAQNFSVVFTRYGKCYTFNA------------------- 205

  Fly   225 LPEGFHAVNWHAELGYRKRGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAYY------CSSS 283
                                      :..:|:.::..|...||.:.||:|.:.|.      ..:|
 Frog   206 --------------------------DKKHPKVSRQGGMGNGLEIMLDIQQEEYLPIWRETNETS 244

  Fly   284 SSIGFKIALHSPNESPNVRETGVLLAPGMETKLRIDPSKILTEKHLRNVDRRSRRC--LFHNELK 346
            ...|.::.:||.:|.|.:.:.|..::||.:|.:...      |:.:..:.:....|  ....|..
 Frog   245 FEAGIRVQIHSQDEPPYIHQMGFGVSPGFQTFVSCQ------EQRMTYLPQPWGNCRSSIPGEEF 303

  Fly   347 LRWFAHYTQRNCVAECLSGWLIRHCGCVTFYMPRLNANDTICPLHKRECVELIRFRTIIAMESCL 411
            |..::.|:...|..:|....:||.|.|...:||   .|:|||......|.:.|....:   |...
 Frog   304 LSGYSTYSISACRLQCEKEAVIRKCACRMVHMP---GNETICSPVMYMCADHILDNMV---EDTS 362

  Fly   412 DECLPSCFDLSFSAIAYSTRISLDGFRETPSNGG-------WNFTDAYVERSVAVVNMYFKDPTF 469
            ::|  || ....:...||..||:   ...|:.|.       :|..:.|:..:..|::::|:...:
 Frog   363 EKC--SC-PTPCNLTRYSKEISM---VRIPNKGSARYLARKYNKNETYIRENFLVLDIFFEALNY 421

  Fly   470 RANKQTEFIGFSDFLSGVGGLMGLFLGFSFLSIAECV--YFALIR------------PCRTCSE- 519
            ...:|.:.......|..:||.||||:|.|||:|.|.:  .:.:||            |.:..|| 
 Frog   422 ETIEQKKAYDLPSLLGDIGGQMGLFIGASFLTILEILDYMYEVIRDKVKRVAGRKQSPAKKPSEN 486

  Fly   520 IRQLNQPRVHQMNLKRSPTPGNIRYISAADWFQAELAHQQPNNRQHF 566
            |..|    |...|..:||.....|:...     |......||:.:|:
 Frog   487 IATL----VMDDNKDQSPCEVRGRHPEG-----AYATTMLPNHHRHY 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk8NP_001036260.3 ASC 42..508 CDD:279230 105/489 (21%)
asic4XP_031749131.1 ASC 39..514 CDD:413546 119/555 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

Return to query results.
Submit another query.