DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and TDX

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_188415.2 Gene:TDX / 821056 AraportID:AT3G17880 Length:380 Species:Arabidopsis thaliana


Alignment Length:288 Identity:116/288 - (40%)
Similarity:168/288 - (58%) Gaps:19/288 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFTMQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGV 65
            |...:|..:|::   |::....||:.|:.|.|.|.|:::...|..||..:........|.     
plant     1 MVDAIQVAELRR---FVEQLKLNPSILHDPSLVFFKEYLRSLGAQVPKIEKTERDYEDKA----- 57

  Fly    66 AGAKANEPANAPEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKATEEEVEQASELR 130
                ..:|:.:|:..:|:..:.  |||||||...|:|.|::|.||||:.:.:.|:|..:.|...:
plant    58 ----ETKPSFSPKHDDDDDDIM--ESDVELDNSDVVEPDNEPPQPMGDPTAEVTDENRDDAQSEK 116

  Fly   131 AQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAA 195
            ::|..|....:|||||...|||:.|:|.:|:.:|.|...|||:|||||.|||.:|||:.|||.|.
plant   117 SKAMEAISDGRFDEAIEHLTKAVMLNPTSAILYATRASVFLKVKKPNAAIRDANVALQFNSDSAK 181

  Fly   196 GYKFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIK 260
            |||.||.|:.:||.:|.||.||..|.|||:|||....||:|.||||:||:||.|.:|.   ||.|
plant   182 GYKSRGMAKAMLGQWEEAAADLHVASKLDYDEEIGTMLKKVEPNAKRIEEHRRKYQRL---RKEK 243

  Fly   261 ERQRDQRRARKEQE--KHNASSGGSSGE 286
            |.||.:|..||:||  :..|.:..:.||
plant   244 ELQRAERERRKQQEAQEREAQAALNDGE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228 10/36 (28%)
TPR repeat 126..154 CDD:276809 11/27 (41%)
NlpI <139..269 CDD:443815 71/129 (55%)
TPR repeat 159..189 CDD:276809 17/29 (59%)
TPR repeat 194..222 CDD:276809 15/27 (56%)
STI1 299..336 CDD:128966
TDXNP_188415.2 Hip_N 6..44 CDD:271228 11/40 (28%)
TPR <108..267 CDD:440225 79/161 (49%)
TPR repeat 112..140 CDD:276809 11/27 (41%)
TPR repeat 145..175 CDD:276809 17/29 (59%)
TPR repeat 180..206 CDD:276809 14/25 (56%)
TRX_family 292..374 CDD:239245
Blue background indicates that the domain is not in the aligned region.

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