DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and spag

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_524664.1 Gene:spag / 43958 FlyBaseID:FBgn0015544 Length:534 Species:Drosophila melanogaster


Alignment Length:354 Identity:69/354 - (19%)
Similarity:125/354 - (35%) Gaps:75/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 NAPEDSEDEKSLSDPESDV-----------------ELDMEGVIEAD-SDPAQPMGNYSKKATE- 120
            ||.|.....|.|...|.|:                 :|.:...::.| |....|..:.:...|| 
  Fly    17 NAREYENSVKDLYSWEQDIKNKEKELQKSPLSAANKDLPVRSHVQTDKSRKESPSSSAASSPTEK 81

  Fly   121 ---------EEVEQASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKP 176
                     ::.::|::::.:..:...|.::::||..|:.||.:.|.:.::|..|...:||.:..
  Fly    82 QDLPVDPVAQQYKKANDIKDRGNTYVKQGEYEKAIVAYSTAIAVYPHDPIYHINRALCYLKQESF 146

  Fly   177 NACIRDCDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLD-FDEETDEWLKEVTPNA 240
            :.|:.||:.|:.|:......|..|.:|...||:...|..|......:: .:.|....|..:....
  Fly   147 DQCVEDCEAAIALDKLCVKAYYRRMQANESLGNNMEALKDCTTVLAIEPKNIEAKRSLARINDRL 211

  Fly   241 KK---------------------IEQHRLKQERRQ----------AERKIKERQRDQRRARKEQE 274
            :|                     ||:...|:.::.          :.|...:.....|.:.::.:
  Fly   212 RKIATKSGPNFTPDRPGMIEILPIEKPAYKRSKKAMRSVPVVDVVSPRATIDDSNQLRISDEDID 276

  Fly   275 KHNASSGGSSGEFSGGNPGNGNMSDILGAMSDPEVSAAIQDILSNPGNITKYA---SNPKIYNLI 336
            |...|:.|...|....||....|.|..|......::...:::........|.|   ..||.....
  Fly   277 KIFNSNCGIIEEVKKTNPKPTPMPDTSGPPKAETIAKTSKEVKPTKQTAVKVAPAVETPKETETR 341

  Fly   337 K--KIVPGGDVGAAFGQAGEKAGKPSEPK 363
            |  ||||..|          ...|||.||
  Fly   342 KDTKIVPESD----------NEAKPSAPK 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228
TPR repeat 126..154 CDD:276809 6/27 (22%)
NlpI <139..269 CDD:443815 31/161 (19%)
TPR repeat 159..189 CDD:276809 8/29 (28%)
TPR repeat 194..222 CDD:276809 7/27 (26%)
STI1 299..336 CDD:128966 6/39 (15%)
spagNP_524664.1 TPR repeat 96..124 CDD:276809 6/27 (22%)
TPR 102..>211 CDD:440225 25/108 (23%)
TPR repeat 129..159 CDD:276809 8/29 (28%)
TPR repeat 164..192 CDD:276809 7/27 (26%)
PLN03209 <296..416 CDD:178748 18/75 (24%)
RPAP3_C 416..503 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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