DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP and Stip1

DIOPT Version :10

Sequence 1:NP_570074.3 Gene:HIP / 318211 FlyBaseID:FBgn0260484 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster


Alignment Length:262 Identity:64/262 - (24%)
Similarity:106/262 - (40%) Gaps:61/262 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VEQASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVAL 187
            :::.:||:.:...|...:|||||:|.||:||.|...|.:.::.|..||.|..|....:.|.:..:
  Fly     1 MDKVNELKEKGNQALSAEKFDEAVAAYTEAIALDDQNHVLYSNRSAAFAKAGKFQEALEDAEKTI 65

  Fly   188 ELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWL----KEVTPNA-------- 240
            :||.....||..:|.|...|.||..|.....:..|.|   .|:..|    .|.|.:|        
  Fly    66 QLNPTWPKGYSRKGAAAAGLNDFMKAFEAYNEGLKYD---PTNAILLQGRMETTASALSFMQSQG 127

  Fly   241 ---KKIEQHRLKQER-------------RQAERKIK---ERQRDQRRARKEQEKHNASSGGSSGE 286
               ..::..:.:..|             :.||.:::   |.|:::..||||:|..||:.      
  Fly   128 DIPMDVDPQQARSRRAPSPPPAKPAEPPKPAEPRVEDMTEEQKNKYFARKEKELGNAAY------ 186

  Fly   287 FSGGNPGNGNMSDILGAMSDPEVSAAIQDILSNPGNITKYASNPKIY-------NLIKKIVPGGD 344
                     ...|...|:.  ...|||:   .:|.:||.|.:...::       ..||:...|.:
  Fly   187 ---------KKKDFETALK--HYHAAIE---HDPTDITFYNNIAAVHFERKEYEECIKQCEKGIE 237

  Fly   345 VG 346
            ||
  Fly   238 VG 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIPNP_570074.3 Hip_N 10..47 CDD:271228
TPR repeat 126..154 CDD:276809 12/27 (44%)
NlpI <139..269 CDD:443815 40/160 (25%)
TPR repeat 159..189 CDD:276809 7/29 (24%)
TPR repeat 194..222 CDD:276809 8/27 (30%)
STI1 299..336 CDD:128966 9/43 (21%)
Stip1NP_477354.1 TPR repeat 7..32 CDD:276809 11/24 (46%)
TPR 10..276 CDD:440225 62/253 (25%)
TPR repeat 37..67 CDD:276809 7/29 (24%)
TPR repeat 72..100 CDD:276809 8/27 (30%)
LapB 173..415 CDD:442196 21/87 (24%)
TPR repeat 175..203 CDD:276809 11/44 (25%)
TPR repeat 208..238 CDD:276809 6/29 (21%)
TPR repeat 250..278 CDD:276809
TPR repeat 310..338 CDD:276809
TPR repeat 343..373 CDD:276809
TPR repeat 378..406 CDD:276809
STI1 429..482 CDD:436075
Blue background indicates that the domain is not in the aligned region.

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