DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbm13 and Mak16

DIOPT Version :9

Sequence 1:NP_001285026.1 Gene:Rbm13 / 31818 FlyBaseID:FBgn0030067 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_080729.1 Gene:Mak16 / 67920 MGIID:1915170 Length:296 Species:Mus musculus


Alignment Length:340 Identity:165/340 - (48%)
Similarity:226/340 - (66%) Gaps:50/340 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQHDDVVWSII-NKSFCSHKVKTDTRTFCRHEYNLTGLCTRRTCPLANSQYATVREEKGIIYLFI 64
            ||.|||:|:.: ||.|||.|::|.|:.|||:||:|||||.|.:||||||||||::||||..||::
Mouse     1 MQSDDVIWNTLGNKQFCSFKIRTKTQGFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQCYLYM 65

  Fly    65 KTAERAHMPSKLWERIKLSRNFEKAIEQINENLVFWPKYMIAKNKQRFLKITQYLIRMRRLKLRR 129
            |..|||..|.:||||::||:|:|||:|||:|||::||:::..|.||||.||||||||:|:|.|:|
Mouse    66 KVIERAAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIRKLTLKR 130

  Fly   130 QKLIVPLSTKIERREARREEKALVAAKIDNHIEKALMDRLKNGTYRDIYNFSQTAFNKALEAERV 194
            |:.:||||.|:||||.|||||||:||::||.|||.|::|||..||.|||||...||:||||.:..
Mouse   131 QRKLVPLSKKVERREKRREEKALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKALEKQEA 195

  Fly   195 DEDDEEELDDEDENEEQLEREMEVDGDDSREAEEVQRSLLDEEFVEADTDDEEEDDDDDDDDDED 259
            :.|.|:|.::|||:||                |:|.:    .||||   |:|.|:.|..|.:|.|
Mouse   196 ESDSEDEEEEEDEDEE----------------EDVGK----REFVE---DEEVEESDLSDFEDMD 237

  Fly   260 DYDSDSGKREEVEVGSDFEESDEDDDADADDIEETKVPAKKTASKAKKDKKSP-AGNSRRSRSKP 323
            ..::||             |.|:||::..|:          .|.|||...|:| .|..|:.|:  
Mouse   238 KLNTDS-------------EEDQDDESSNDE----------EAHKAKHKGKAPLKGPLRKKRA-- 277

  Fly   324 KLQLEYEYEVEKEAQ 338
            .:::|||.|.|..|:
Mouse   278 YVEIEYEQETEPMAK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbm13NP_001285026.1 PLN00040 1..225 CDD:215038 130/224 (58%)
Ribosomal_L28e 6..115 CDD:280030 65/109 (60%)
Mak16 139..241 CDD:282698 49/101 (49%)
Mak16NP_080729.1 MAK16 2..288 CDD:227458 162/333 (49%)
Ribosomal_L28e 6..116 CDD:280030 65/109 (60%)
Mak16 148..>194 CDD:282698 30/45 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..275 38/130 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834487
Domainoid 1 1.000 161 1.000 Domainoid score I4026
eggNOG 1 0.900 - - E1_COG5129
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 302 1.000 Inparanoid score I2658
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54003
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004909
OrthoInspector 1 1.000 - - oto95378
orthoMCL 1 0.900 - - OOG6_102084
Panther 1 1.100 - - LDO PTHR23405
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R678
SonicParanoid 1 1.000 - - X3461
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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