DRSC/TRiP Functional Genomics Resources

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Protein Alignment Moe and frmd4b

DIOPT Version :9

Sequence 1:NP_727290.1 Gene:Moe / 31816 FlyBaseID:FBgn0011661 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_002940561.2 Gene:frmd4b / 100489171 XenbaseID:XB-GENE-958639 Length:1024 Species:Xenopus tropicalis


Alignment Length:669 Identity:140/669 - (20%)
Similarity:262/669 - (39%) Gaps:160/669 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DAELEFAIQSTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDSTWIKLYKKPESPAIKTIKYLK 96
            |.|||..:|.....::|.|.|.....|:|..:||:.:.|..|...|::|                
 Frog    68 DRELELLVQPKLLSRELLDLVASHFSLKEKEYFGISFLDDTGQYAWLQL---------------- 116

  Fly    97 RVKKYVDKKTADSNGVNHLETSEEDDDADDMTGSMPFSTWVMNQDVKKENPLQFRFRAKFYPEDV 161
                  |::..|.:                    .|          ||..|:...|..:||.|.:
 Frog   117 ------DQRVLDHD--------------------FP----------KKSGPVSLYFVVRFYIESI 145

  Fly   162 AEELIQDI-TLRLFYLQVKNAILTDEIYCPPETSVLLASYAVQARHGDHNKTTHTAGFLANDRLL 225
            .  .::|| |:.||:|..|..:....|....||...||:..:|...||::...:....|.....|
 Frog   146 T--FLKDITTVELFFLNAKACVFKGLIEVDSETIFKLAALILQEARGDYSSDENARKDLKILPAL 208

  Fly   226 PQRVIDQHKMSKDEWEQSIMTWWQEHRSMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKGTDLWL 290
            |.|.:.:|. |....|..::...::.:.:.|..|::.|:||.:.|..|||:|:::::|:|...||
 Frog   209 PTRALQEHP-SLSYCEDRVIEHCKKLKGVTRGQAIVRYMKIVEALPTYGVHYYKVKDKQGIPWWL 272

  Fly   291 GVDALGLNIYEQDDRLTPKIGFPWSEIRNISFSEKKFIIKPIDKKAPDFMFFAPRVRINKR---- 351
            |:...|:..|:..|::.|:..|.|.::.|:.|.||||.::..|.:         |:.:::|    
 Frog   273 GISFKGIGQYDIQDKIKPRKLFQWKQLENLYFREKKFAVEVHDPR---------RISVSRRTFGQ 328

  Fly   352 -----------------ILALCMGNHELYMRRRKPDTIDVQQMKAQAREEKNAKQQEREKLQLAL 399
                             |..:.:..|:.|:.|:        |.||:.   .:||..:...::|..
 Frog   329 SSLVVQTWYASNSLIKSIWVMAISQHQFYLDRK--------QSKAK
I---PSAKSLDDIAMELTE 382

  Fly   400 AARERAEKKQQ--------EYEDRLKQMQEDMERSQRDLLEAQDMIRRLEEQLKQLQAAK-DELE 455
            |...:..:..:        .....:....:|.|.|:...:|....:::.||.|:.:...| :||:
 Frog   383 AGTTKVARIVEGKNPLIMASSGSLISSGSQDSEISEEQRMEKIQELKKKEEALQNILLKKIEELK 447

  Fly   456 ---LRQKELQAMLQRL------EEAKN----MEAVEKL-------------KLEEEIMAKQMEVQ 494
               ||:.||...|...      |:..|    |.|..||             :||.:.:.:|..|:
 Frog   448 KICLREAELTGKLPTEYPLNPGEKPPNVRRRMGATFKLNDILHTDEDPALQELERKFLIQQQLVE 512

  Fly   495 ---RIQDEVN-AKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTP--QHHHVAEDENENEEE 553
               ::..|.: :|:.:.||.||..:..::.|.:.:......:.:..||  :...:.:|:....|.
 Frog   513 ATKKLATEPDLSKNVKRKRKQDYSDSIKKLQELESTINEFRVKSGKTPTKRASMILQDDIIPSET 577

  Fly   554 LTNGDAGGDVSRDLDTDEHIKDPIEDRRTLAERNERLHDQ-----LKALKQD--LAQSRDETKET 611
            .:..|.               ..:||..:...:.:|||:.     .|::..|  ||:.....::.
 Frog   578 SSLSDT---------------TTLEDDESQLPQGQRLHNSPNVHLTKSIGGDKSLARKFSLNEQL 627

  Fly   612 ANDKIHRENVRQGRDKYKT 630
            :..::.||........|||
 Frog   628 SEMRVTREPSSTHSSPYKT 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MoeNP_727290.1 B41 26..278 CDD:214604 57/246 (23%)
FERM_N 28..83 CDD:286467 16/50 (32%)
FERM_M 163..278 CDD:278785 31/115 (27%)
FERM_C_ERM 272..368 CDD:270015 28/116 (24%)
GBP_C <375..497 CDD:303769 32/159 (20%)
ERM 403..649 CDD:279153 51/276 (18%)
coiled coil 464..477 CDD:293879 4/22 (18%)
coiled coil 486..497 CDD:293879 2/13 (15%)
frmd4bXP_002940561.2 Ubiquitin_like_fold 57..145 CDD:391949 26/128 (20%)
B41 60..260 CDD:214604 57/246 (23%)
FERM_C_FRMD4A_FRMD4B 256..366 CDD:270012 29/126 (23%)
DUF3338 393..525 CDD:371743 26/131 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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