DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr9a and Gr59f

DIOPT Version :9

Sequence 1:NP_727392.1 Gene:Gr9a / 318158 FlyBaseID:FBgn0052693 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_788432.1 Gene:Gr59f / 37726 FlyBaseID:FBgn0041234 Length:406 Species:Drosophila melanogaster


Alignment Length:379 Identity:73/379 - (19%)
Similarity:142/379 - (37%) Gaps:115/379 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLWLEHFLTGYFQLCGLVCGWSGSRLGRLLSSTFLVLILIELVGEIETYFTEENPDNESVPAYF 65
            |.||...|:.|.:        |.            .||:..:.|               |:..| 
  Fly    71 MILWYGLFVLGSY--------WE------------FVLVTTQRV---------------SLDRY- 99

  Fly    66 AKVIMGVNMAYKMIHAWIALSALFECRRFRYLLEELPPVKATSFI---------------YRHLI 115
               :..:..|..::|.:..:...::||.:       .|...|:.:               .|.:.
  Fly   100 ---LNAIESAIYVVHIFSIMLLTWQCRNW-------APKLMTNIVTSDLNRAYTIDCNRTKRFIR 154

  Fly   116 LEIIL---FACNA---------FLVL-SEYTIRGIYLENL-------RYAYSLQAVRARYLQMMV 160
            |::.|   |||.|         |:|. |..:|....:.|:       :|...||.:..|..:   
  Fly   155 LQLFLVGIFACLAIFFNIWTHKFVVYRSILSINSYVMPNIISSISFAQYYLLLQGIAWRQRR--- 216

  Fly   161 LVDRLDGKLEQLHHRVISGSSDYKTLRLDYAHLAKVTRSLSHLFGLSLLLLNVLCLGDWIIVCNV 225
            |.:.|:.:|..||...|   |:.:.:|:.:|:|...|::::..|..|:|||.|.|..::    |:
  Fly   217 LTEGLERELTHLHSPRI---SEVQKIRMHHANLIDFTKAVNRTFQYSILLLFVGCFLNF----NL 274

  Fly   226 YFMVAYLQVLPATLFLFGQVMFVVCPTLIKIWSICAASH----------RCVSKSKHLQQQLKDL 280
            ...:.|..:...::..|.:.:.::....:.:..:|:..|          .|::....:....||:
  Fly   275 VLFLVYQGIENPSMADFTKWVCMLLWLAMHVGKVCSILHFNQSIQNEHSTCLTLLSRVSYARKDI 339

  Fly   281 PGQTPVERSQIEGFALQIMQDPIQIDVCGIYHLNLQTL-------AGMFFFILE 327
                   :..|..|.:|:..:..|..|||:.:|:|:.|       |..|.|:|:
  Fly   340 -------QDTITHFIIQMRTNVRQHVVCGVINLDLKFLTTLLVASADFFIFLLQ 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr9aNP_727392.1 7tm_7 7..335 CDD:285581 70/373 (19%)
Gr59fNP_788432.1 7tm_7 61..388 CDD:303125 73/379 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.