DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and RABA1b

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_173136.1 Gene:RABA1b / 838263 AraportID:AT1G16920 Length:216 Species:Arabidopsis thaliana


Alignment Length:173 Identity:71/173 - (41%)
Similarity:106/173 - (61%) Gaps:12/173 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRM---GRML--QVW 63
            ||..||::|:|||||||:.||.||:.|:|....:||:|       ||||...:   |:::  |:|
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIG-------VEFATRTLKVDGKVVKAQIW 67

  Fly    64 DTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPN 128
            ||:..||::.:.:...|.|.|.|||||:|...:|:|:|.|:||::......::|:|||||||..:
plant    68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRH 132

  Fly   129 HRQVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIY 171
            ...|....|.:||.::|:||.|.||....||.|.|:.:...||
plant   133 LLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 67/163 (41%)
RABA1bNP_173136.1 Rab11_like 11..175 CDD:206660 68/170 (40%)

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