Protein Alignment Rab9D and RAB1C

DIOPT Version :9

• Sequence 1: NP_727432.1
• Gene: Rab9D / 318149
• FlyBaseID: FBgn0067052
• Length: 197
• Species: Drosophila melanogaster
• Sequence 2: NP_193486.1
• Gene: RAB1C / 827468
• AraportID: AT4G17530
• Length: 202
• Species: Arabidopsis thaliana
• Alignment Length: 172
• Identity: 70/172 - (40%)
• Similarity: 106/172 - (61%)
• Gaps: 6/172 - (3%)

  Fly     3 QYDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGR--MLQVWDT 65
            :||..||::|:|||||||:|||:||:|:.:...:.||:|:|.:..:||    :.|:  .||:|||
plant     4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE----QDGKTIKLQIWDT 64

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130
            :..|||:.:.::..|.||||::.||:|..:||.|:..|:.||.|...:.|..||||||.|..:.:
plant    65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQK 129

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYT 172
            .||......:|....|.|.|.|||:..||.:.|.::...|.|
plant   130 VVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKT 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab9D	NP_727432.1	RAB	8..171	CDD:197555	66/164 (40%)
		Rab	8..167	CDD:206640	66/160 (41%)
RAB1C	NP_193486.1	Rab1_Ypt1	7..172	CDD:206661	68/169 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.780