DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and rab12

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001018466.1 Gene:rab12 / 553657 ZFINID:ZDB-GENE-050522-555 Length:235 Species:Danio rerio


Alignment Length:167 Identity:68/167 - (40%)
Similarity:99/167 - (59%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |...::|::|..|||||.|:.||:|:.|....:||||:|.:..:||....::  .||:|||:..|
Zfish    33 DYKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI--RLQIWDTAGQE 95

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVSM 134
            ||..:.:...|.|.||:||||||..::|:::..|||.|.:...:...:||||||.|..:.|.:|.
Zfish    96 RFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESDRAISR 160

  Fly   135 AQGFNYAHRQS-ICFEEVSAKSGRNVYDIFSSLAMDI 170
            .|...:|.|.| :.|.|.|||...||.:||..|..||
Zfish   161 QQAERFASRISGMRFCEASAKDNFNVDEIFLKLVDDI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 64/159 (40%)
rab12NP_001018466.1 Rab12 36..235 CDD:206699 67/164 (41%)

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