DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and rab19

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001017246.1 Gene:rab19 / 550000 XenbaseID:XB-GENE-495128 Length:213 Species:Xenopus tropicalis


Alignment Length:189 Identity:64/189 - (33%)
Similarity:103/189 - (54%) Gaps:9/189 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDD 68
            :|..|||||:|||.|||||::.||....|....::|:|:|....::.....::  .:|||||:..
 Frog    12 FDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKV--KVQVWDTAGQ 74

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133
            |||:.:..:..|||||.::.||||..:||:::..|:.|..:.....::::|:|||||....||:.
 Frog    75 ERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQIL 139

  Fly   134 MAQGFNYAHRQS-ICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHY------NPFSLTS 185
            ..:....|.:.. :...|.|||...||.::|..:|.::......||      |.|.|.|
 Frog   140 FEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESPRNSFMLDS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 56/159 (35%)
rab19NP_001017246.1 Rab19 13..177 CDD:133267 58/165 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 37..52 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 72..87 3/14 (21%)

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