DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab19

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:174 Identity:58/174 - (33%)
Similarity:98/174 - (56%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |..||:||:|||.|||||::..|....::...::|:|:|....|:|. |.:..:| |||||:..|
  Rat    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEI-DGKKVKM-QVWDTAGQE 77

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVSM 134
            ||:.:..:..||||..::.||:|...:|:::..|:.||.:.....::::|:|||||....|.|..
  Rat    78 RFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLF 142

  Fly   135 AQGFNYAHRQS-ICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVH 177
            ......|.:.. :...|.|||..||:.::|..:|.::.....:|
  Rat   143 EDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 55/159 (35%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 57/165 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 2/14 (14%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 3/14 (21%)

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