DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and rab1bb

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001002129.2 Gene:rab1bb / 415219 ZFINID:ZDB-GENE-040625-133 Length:201 Species:Danio rerio


Alignment Length:170 Identity:69/170 - (40%)
Similarity:105/170 - (61%) Gaps:6/170 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGR--MLQVWDT 65
            :||..||::|:|||||||:|:|:||:|:.:|....||:|:|.:..::|..    |:  .||:|||
Zfish     4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELD----GKTIKLQIWDT 64

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130
            :..|||:.:.::..|.||||::|||:|..:|:.|:..|:|||.|...:.|..||||||.|....:
Zfish    65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKK 129

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .|.......:|....|.|.|.|||:..||...|.::|.:|
Zfish   130 VVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 65/160 (41%)
rab1bbNP_001002129.2 Rab1_Ypt1 7..172 CDD:206661 67/167 (40%)

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