DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab9

DIOPT Version :9

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_609966.1 Gene:Rab9 / 35221 FlyBaseID:FBgn0032782 Length:256 Species:Drosophila melanogaster


Alignment Length:194 Identity:58/194 - (29%)
Similarity:89/194 - (45%) Gaps:27/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLD--RRECSVEFADWRMGRMLQVWDTSDDERF 71
            |:::|||.||||:.||.||..|::...:..|:|::  .::..|:...:    .||:|||:..|||
  Fly    14 KVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERY----TLQIWDTAGQERF 74

  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLC---PDKVIVLLVGNKSDDP-NHRQV 132
            :.|:....|.:...||.|.:....|.:.:..|..|.....   .||...::||||:|.| ..|||
  Fly    75 RALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADVDQDKFPFIVVGNKNDIPAQKRQV 139

  Fly   133 SMAQGFNYAHRQSI-CFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEEDAAES 195
            |......:...|.: |..|.|:|:..||.|.|                ...|..|:..|..||:
  Fly   140 SSDAVQQWCAEQKVACHIETSSKAATNVTDAF----------------VLGLRQWRHMECVAEA 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 RAB 8..171 CDD:197555 53/168 (32%)
Rab 8..167 CDD:206640 53/164 (32%)
Rab9NP_609966.1 Rab9 8..178 CDD:206697 54/183 (30%)
Ras 14..177 CDD:278499 54/182 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454366
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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