DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab6

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:167 Identity:63/167 - (37%)
Similarity:98/167 - (58%) Gaps:5/167 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNP---FKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDT 65
            :.||   ||::.||:..||||.|:.||..:.|...:::|:|:|....::...| |..| ||:|||
  Fly     6 FGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED-RTVR-LQLWDT 68

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130
            :..|||:.|..:..|.:...::|||||::.||.....|:.::|......||::|||||:|..:.|
  Fly    69 AGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 133

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            |||..:|...|...::.|.|.|||:|.||..:|..:|
  Fly   134 QVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 60/158 (38%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 61/160 (38%)

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