DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab9Fb

DIOPT Version :9

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:199 Identity:121/199 - (60%)
Similarity:148/199 - (74%) Gaps:7/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGR--MLQVW 63
            |||||..|||::|||.||||:|||||||||:||.:|..|||:|.|..:||.|    ||  |||:|
  Fly     1 MSQYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELA----GRMVMLQIW 61

  Fly    64 DTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPN 128
            ||:.|||||.|..:..|.||||||||||||||||:|||||:|||||:..:.|.|:|||||.||.:
  Fly    62 DTAGDERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLD 126

  Fly   129 HRQVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEEDAA 193
            :|||.|.||||||:.:::.|.|||||||.||.|:|:.|::.||. |.|.:.|..|:..||.||.|
  Fly   127 NRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN-RLVIHTPNRLSGGQETEDTA 190

  Fly   194 ESLD 197
            |..|
  Fly   191 EPPD 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 RAB 8..171 CDD:197555 103/164 (63%)
Rab 8..167 CDD:206640 102/160 (64%)
Rab9FbNP_727472.1 RAB 8..171 CDD:197555 105/167 (63%)
Rab 8..165 CDD:206640 102/160 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464165
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1149105at2759
OrthoFinder 1 1.000 - - FOG0009971
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47980
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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