DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab27

DIOPT Version :9

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:157 Identity:65/157 - (41%)
Similarity:91/157 - (57%) Gaps:9/157 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEF-ADWRMGRM-LQVWDTSDDERF 71
            :.::||||||||||||.:::|.:|.|:..||||:|.||..:.: :..|..|: ||:|||:..|||
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLC----PDKVIVLLVGNKSDDPNHRQV 132
            :.|.....|.|.|.||::|:||.|||.....|:.::|...    ||   |:|.|||.|....|.|
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPD---VVLCGNKCDLLQLRVV 145

  Fly   133 SMAQGFNYAHRQSICFEEVSAKSGRNV 159
            |..|......|..:.:.|.||.:|.||
  Fly   146 SRDQVAALCRRYRLPYIETSACTGANV 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 RAB 8..171 CDD:197555 65/157 (41%)
Rab 8..167 CDD:206640 65/157 (41%)
Rab27NP_726743.1 P-loop_NTPase 19..187 CDD:304359 65/157 (41%)
RAB 20..186 CDD:197555 65/156 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454380
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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