DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and ypt2

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_594580.1 Gene:ypt2 / 2543280 PomBaseID:SPAC9E9.07C Length:200 Species:Schizosaccharomyces pombe


Alignment Length:179 Identity:73/179 - (40%)
Similarity:106/179 - (59%) Gaps:2/179 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||...|::|:|||||||:|||:|||::.||....:|:|:|.:..::|....|:  .||:|||:..
pombe     6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRI--KLQIWDTAGQ 68

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133
            |||:.:.....|.|.||||:||:|..|||.|:..|...:.:...:.|..:|:|||.|..:.||||
pombe    69 ERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVS 133

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFS 182
            ..||...|....:.|.|.|||:..||.:.|.:||.:|...:....|.||
pombe   134 FEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFS 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 65/158 (41%)
ypt2NP_594580.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 69/167 (41%)

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