DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and Rab33a

DIOPT Version :9

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_036017751.1 Gene:Rab33a / 19337 MGIID:109493 Length:258 Species:Mus musculus


Alignment Length:124 Identity:42/124 - (33%)
Similarity:60/124 - (48%) Gaps:5/124 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LQVWDTSDDERF-KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIR-RLCPDKVIVLLVGN 122
            :|||||:..||| |.:.....|:.|.::.|||:|...||.|:..|::|.. ...|..|..:||||
Mouse   108 VQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGN 172

  Fly   123 KSDDPNHRQVSMAQGFNYAHRQSICFEEVSA---KSGRNVYDIFSSLAMDIYTYRRVHY 178
            |.|.....||.......:|...::...|.||   |..:||..||..||..:...:.:.|
Mouse   173 KCDLREQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLKAQKSLLY 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 RAB 8..171 CDD:197555 41/115 (36%)
Rab 8..167 CDD:206640 39/111 (35%)
Rab33aXP_036017751.1 P-loop_NTPase <108..225 CDD:422963 41/116 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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