Protein Alignment Rab9D and rab-35

DIOPT Version :9

• Sequence 1: NP_727432.1
• Gene: Rab9D / 318149
• FlyBaseID: FBgn0067052
• Length: 197
• Species: Drosophila melanogaster
• Sequence 2: NP_499454.1
• Gene: rab-35 / 176560
• WormBaseID: WBGene00004284
• Length: 209
• Species: Caenorhabditis elegans
• Alignment Length: 184
• Identity: 71/184 - (38%)
• Similarity: 115/184 - (62%)
• Gaps: 5/184 - (2%)

  Fly     4 YDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||:.||::::|||||||:.||:||:||.|:..:.:|:|:|.:..:::....|:  .||:|||:..
 Worm     7 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRV--KLQIWDTAGQ 69

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133
            |||:.:.:|..|..||:::|||:|:.:||.|:..|::||...| |.|..:|||||.::...|.|.
 Worm    70 ERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNC-DSVQKVLVGNKCEENERRVVL 133

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQ 187
            .:...|||...:|.|.|.|||..:||..:|:.:...:.|.:..  ||.|.:..|
 Worm   134 ESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLA--NPQSASKDQ 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab9D	NP_727432.1	RAB	8..171	CDD:197555	64/162 (40%)
		Rab	8..167	CDD:206640	64/158 (41%)
rab-35	NP_499454.1	Rab35	5..208	CDD:133310	71/184 (39%)
		RAB	11..171	CDD:197555	64/162 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920