DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9D and RAB35

DIOPT Version :10

Sequence 1:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_006852.1 Gene:RAB35 / 11021 HGNCID:9774 Length:201 Species:Homo sapiens


Alignment Length:163 Identity:67/163 - (41%)
Similarity:108/163 - (66%) Gaps:3/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||:.||::::|||||||:.||:||:||.|:..:.:|:|:|.:..:||....::  .||:|||:..
Human     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV--KLQIWDTAGQ 67

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133
            |||:.:.:|..|..||:::|||:||::||.|:..|:.||.:.| |.|..:|||||:|||..:.|.
Human    68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVE 131

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSL 166
            ....:.:|.:..|...|.|||...||.::|:.:
Human   132 TEDAYKFAGQMGIQLFETSAKENVNVEEMFNCI 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DNP_727432.1 Rab 8..167 CDD:206640 65/159 (41%)
RAB35NP_006852.1 Rab35 3..201 CDD:133310 67/163 (41%)
Switch 1. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 64..80 5/15 (33%)

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