DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9E and rab12

DIOPT Version :10

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_002937521.2 Gene:rab12 / 779581 XenbaseID:XB-GENE-492791 Length:248 Species:Xenopus tropicalis


Alignment Length:167 Identity:67/167 - (40%)
Similarity:102/167 - (61%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |...::||:|..|||||.|:.||:|:.|....:||:|:|.:..:||....::  .||:|||:..|
 Frog    44 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI--RLQIWDTAGQE 106

  Fly    70 RFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVSM 134
            ||..:.:.:.|||.||:||||||..::|:::..|||.|.:...::..:||||||.|....|:::.
 Frog   107 RFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDREITR 171

  Fly   135 AQGFNYAHR-QSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .||..:|.: ..:.|.|.|||...||.:||..|..||
 Frog   172 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 Rab 8..167 CDD:206640 63/159 (40%)
rab12XP_002937521.2 P-loop containing Nucleoside Triphosphate Hydrolases 47..248 CDD:476819 66/164 (40%)

Return to query results.
Submit another query.