DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9E and RAB40C

DIOPT Version :10

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_066991.3 Gene:RAB40C / 57799 HGNCID:18285 Length:281 Species:Homo sapiens


Alignment Length:167 Identity:61/167 - (36%)
Similarity:88/167 - (52%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDT 65
            :..||...|.:::|||.|||..:|....|....:.:..:.|:|.:..:: ..|.|..: |::|||
Human     8 VKSYDYLLKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTI-LLDGRRVK-LELWDT 70

  Fly    66 SDDERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130
            |...||..:..::.|.|.|||||||||:..||..||.|:|||....|. |..:||||:......|
Human    71 SGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPG-VPRILVGNRLHLAFKR 134

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            ||...|...||.:..:.|.|||.....||.:.|:.|:
Human   135 QVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELS 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 Rab 8..167 CDD:206640 58/158 (37%)
RAB40CNP_066991.3 Rab40 9..281 CDD:133321 61/166 (37%)
Switch-I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 41..49 0/7 (0%)
Switch-II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 72..88 3/15 (20%)
SOCS_Rab40 187..229 CDD:239711
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..281
Blue background indicates that the domain is not in the aligned region.

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