DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9E and Rab23

DIOPT Version :10

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_649574.1 Gene:Rab23 / 40701 FlyBaseID:FBgn0037364 Length:268 Species:Drosophila melanogaster


Alignment Length:190 Identity:50/190 - (26%)
Similarity:88/190 - (46%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMD--RRECSVEFADWRMGRMLQVWDTSDDERF 71
            |::|:|:.||||:.::.|:....||..::.|:|:|  .|:..::..|.|    :.:|||:..|.|
  Fly    39 KVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVR----IMLWDTAGQEEF 99

  Fly    72 KLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVSMAQ 136
            ..:...:.|.|...:||:..|...||..|..|.:::...| :::..::|.||.|......|:..:
  Fly   100 DCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENEC-NEIPTVIVQNKIDLIEQAVVTADE 163

  Fly   137 GFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIY-----TYRRVHYN-------PFSLT 184
            ....|...:......|.|...||..:|..||...:     :|.:|..|       |:|.|
  Fly   164 VETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSSHPPYSST 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 Rab 8..167 CDD:206640 42/159 (26%)
Rab23NP_649574.1 Rab23_like 50..197 CDD:133306 38/151 (25%)

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