DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9E and Rab26

DIOPT Version :9

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:198 Identity:70/198 - (35%)
Similarity:113/198 - (57%) Gaps:6/198 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRH-RSTLGMDRRECSVEFADWRMGRMLQVWDTS 66
            ::|...|:|:|||||||||.||:||.|.::...: .||:|:|.|...|.....|:  .||:|||:
  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRV--KLQIWDTA 270

  Fly    67 DDERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSD-DPNHR 130
            ..|||:.:...:.|.||.:||:||:|:..::.||..|:.|||....:.|:::|:|||:| ..:.|
  Fly   271 GQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSER 335

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYT--YRRVHYNPFSLTSWQEEEDAA 193
            ||....|.......::.|.|.|||:|.||...|:::|..:.:  |.......|::..:..:...|
  Fly   336 QVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYEHGDDGKFNVHDFVRDNTKA 400

  Fly   194 ESL 196
            .|:
  Fly   401 RSV 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 RAB 8..171 CDD:197555 65/164 (40%)
Rab 8..167 CDD:206640 64/160 (40%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 69/192 (36%)
RAB 214..378 CDD:197555 65/165 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454297
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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