DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9E and RabX2

DIOPT Version :10

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:198 Identity:142/198 - (71%)
Similarity:163/198 - (82%) Gaps:4/198 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDT 65
            ||.:|..||:::||||||||:||||||||::||.::..|:|:|.:..|||.....|  |||||||
  Fly     1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVM--MLQVWDT 63

  Fly    66 SDDERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHR 130
            |.|:||..|..::.||||||||||||||||||||||||||||||:|||||.||||||||||||||
  Fly    64 SGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHR 128

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFS-LTSWQEEEDAAE 194
            ||||.||||||||.::.|||||||||.|||||||||||||| :|.|.:||.| :.|.||||||||
  Fly   129 QVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY-HRYVLHNPISPMPSEQEEEDAAE 192

  Fly   195 SLD 197
            |.|
  Fly   193 SPD 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 Rab 8..167 CDD:206640 117/158 (74%)
RabX2NP_572627.1 Rab 8..165 CDD:206640 117/158 (74%)

Return to query results.
Submit another query.