DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9E and rab8b

DIOPT Version :10

Sequence 1:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001092729.1 Gene:rab8b / 100093706 ZFINID:ZDB-GENE-070620-16 Length:209 Species:Danio rerio


Alignment Length:178 Identity:78/178 - (43%)
Similarity:110/178 - (61%) Gaps:4/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||..||::::|||||||||||.|||::.|.|...||:|:|.:..::|....::  .||:|||:..
Zfish     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI--KLQIWDTAGQ 67

  Fly    69 ERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133
            |||:.:...:.|.|.||:||||||:.|||.||..|::.|.......|..:::|||.|..:.||||
Zfish    68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYT--YRRVHYN 179
            ..:|...|....|.|.|.||||..||.:.|.:||.||.|  .|:::.|
Zfish   133 KERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTRLNRKMNEN 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9ENP_727438.1 Rab 8..167 CDD:206640 69/158 (44%)
rab8bNP_001092729.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/167 (44%)

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