DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32668 and Pkp2

DIOPT Version :9

Sequence 1:NP_727502.1 Gene:CG32668 / 318147 FlyBaseID:FBgn0052668 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_080439.1 Gene:Pkp2 / 67451 MGIID:1914701 Length:795 Species:Mus musculus


Alignment Length:832 Identity:165/832 - (19%)
Similarity:283/832 - (34%) Gaps:218/832 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LRRRSRSET------RPQANPAEMAK-QPADSDKSDRQQQLAKHHQMRHHQPHASEQSLNKLGLV 62
            |.||.||..      |..:.|..:.| ...::|...||..:.:.:.|.            |.|:.
Mouse    64 LARRGRSSAVSGNLHRTSSVPEYVYKLHVVENDFVGRQSPVTRDYDML------------KAGMT 116

  Fly    63 SSGTSGMGR---RKTSAELISEAK-----MFLGESVNAVPLLATGG---------ARLVSTRRPI 110
            ::..|..||   :.:|.:.:.|..     ..|..|.::.|..|..|         :.:|...|..
Mouse   117 ATYGSRWGRAAAQYSSQKSVEERSWRQPLRRLEISPDSSPERAHYGHSEYQYAWRSHVVPGGRLT 181

  Fly   111 TPRESGRVLYG--KVALAGRPP--SAFSMRYLQNE--KPSTPRQLPALSGSVSATPMPTRNGALL 169
            .||.:...:.|  :...|.|||  .:||.....|.  ||:.|...|..|.|.         |:||
Mouse   182 LPRYARSEILGLRQAGTARRPPGCGSFSDAVFDNGPLKPTMPTHPPGTSHSA---------GSLL 237

  Fly   170 CQSSTETLIELLKQHSGLKDCSDETVQHINAILQELYTRVRKQERNYKRGFILGGLYGLVECTSP 234
                                 .:.||:...|.||...:|..:.                   :.|
Mouse   238 ---------------------EETTVRVSQARLQSTQSRTARS-------------------SWP 262

  Fly   235 RVLLAVARVVLALRVTGSNLTGACKLIFKVARHEQH-------DALFHEHDVLELLIDGLGHASP 292
            |     :.|..:||..|..||.|.:.  .|...:.|       ||.....|: |:.::...:...
Mouse   263 R-----SSVRSSLREPGRMLTTAGQA--AVGSGDAHGDRSVFADAQLGNADI-EMTLERAVNMLD 319

  Fly   293 LDE-PEACIYAYGCIRFLTASSAQERDDALNRNWIGLETSGESQSLPIPALMPPALSAISTSLCP 356
            .|. |.:.|.|  ...|:...|.| :.:|..|         .:|...||.|:             
Mouse   320 ADHVPVSKISA--AATFIQHESFQ-KSEARKR---------VNQLRGIPKLL------------- 359

  Fly   357 RKLTGQQTLVSRLARHGAVELMILHLQMLNEAGATKRLQGPPLHTLYQLSAAMRALADVSQQQQR 421
            :.|..|...|.| |..||:..::..       ....:|:...|:.:.:|...::...|:..::|.
Mouse   360 QLLKLQNEDVQR-AACGALRNLVFE-------DNDNKLEVAELNGVPRLLQVLKQTRDLETKKQI 416

  Fly   422 LQLQLQLACPHLIRAAEVSMGELEVQANVVRTLSVLSE----------DSDCCETLHNYAARIGL 476
            ..|...|:....::...::...|.:..:|:...|...|          |.|   ..:|..   |.
Mouse   417 TGLLWNLSSSDKLKHLMITEALLTLTESVIIPFSGWPEGDYPKANGLLDFD---IFYNVT---GC 475

  Fly   477 LLGPSCAG--GGQWSERLLAVL-SRLGYMLGNILAKHESARIQYFHNDVAMEYLLNVLEQLNERS 538
            |...|.||  |.:...|...:: |.:.|:.|.|        ..|..:|.|.|..:.:|..|:.:.
Mouse   476 LRNMSSAGPDGRKMMRRCDGLIDSLVHYVRGTI--------ADYQPDDKATENCVCILHNLSYQL 532

  Fly   539 PSSVAHLDAQIKLIRVVANMSVNPEVGAGLGNVRSLGAVLLQLLSKTSEELTKKKSPEQQE---- 599
            .:.:....:| .:.....|:..|.....|....||         .|..|:....:.||::.    
Mouse   533 EAELPEKYSQ-SIYMQNRNIQTNSNKSIGCFGSRS---------RKLKEQYQDLQMPEERSNPHG 587

  Fly   600 ---LLHATLGALHNLCFYQDKQAAVQPLAEGSLQSL------IDDLSASLA-----------KVL 644
               |.|:.:..::.....:..:...|..:.|:||:|      |..|.|.:.           |:|
Mouse   588 IEWLWHSIVIRMYLSLIAKSTRNYTQEASLGALQNLTAGGGPIPTLVARMVVQKENGLQHTRKML 652

  Fly   645 GNCQTSVTKVELARVLGNLTR-----NEQARRCFCAAGGLPLMVQQLTKQAAGQDYELRTCAIG- 703
            .....||.|..:: :|.||:|     ||.|:..      ||.:|..:.......|..:.|.|.. 
Mouse   653 HVGDPSVKKTAVS-LLRNLSRNLSLQNEIAKET------LPDLVSIIPDTVPSTDLLIETTASAC 710

  Fly   704 -VLVNLLGDGEQRGPFLQLRGA--ELLSLLL-RGSLEQEDWFLANIVCQALW 751
             .|.||:.:..|....|...|.  :::::.: .|....:....|:::..:||
Mouse   711 YTLNNLMQNSYQNARDLLNTGGLQKIMTISIGEGYAPNKASKAASVLLYSLW 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32668NP_727502.1 armadillo repeat 571..611 CDD:293788 8/46 (17%)
armadillo repeat 619..665 CDD:293788 16/62 (26%)
armadillo repeat 670..708 CDD:293788 7/39 (18%)
Pkp2NP_080439.1 ARM 308..425 CDD:237987 28/149 (19%)
armadillo repeat 311..338 CDD:293788 5/28 (18%)
armadillo repeat 346..382 CDD:293788 12/58 (21%)
armadillo repeat 388..423 CDD:293788 6/34 (18%)
armadillo repeat 435..479 CDD:293788 9/49 (18%)
ARM 589..718 CDD:237987 31/135 (23%)
armadillo repeat 636..670 CDD:293788 6/34 (18%)
armadillo repeat 678..718 CDD:293788 12/45 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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