DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32668 and pkp2

DIOPT Version :9

Sequence 1:NP_727502.1 Gene:CG32668 / 318147 FlyBaseID:FBgn0052668 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_001106904.1 Gene:pkp2 / 568060 ZFINID:ZDB-GENE-041210-167 Length:815 Species:Danio rerio


Alignment Length:904 Identity:166/904 - (18%)
Similarity:297/904 - (32%) Gaps:316/904 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PQANPAEMAKQPADSDKSDR-QQQLAKHHQMRHHQPHASEQSLNKLGLVSSGTSGMGRRKTSAEL 78
            |.||...:    ||:.:.:| |||:......:..:|..::.||             ...::|.::
Zfish    55 PLANKLTL----ADAHRLNRLQQQVQLTLSRKKRKPKPADSSL-------------AESQSSCQI 102

  Fly    79 ISEAKMFLGE-------SVNAVPLLATGGARLV------STRRPI----------TPRESGRVL- 119
            .|.:.  ||.       |||..   ||...|:|      |...|:          ||:.:|..| 
Zfish   103 SSSSS--LGSLHLKRTFSVNHE---ATRSLRMVDRSQWPSMEPPLFHRGYGSFRYTPKRAGLCLG 162

  Fly   120 YGKVALAGRP-PSAFSM-----RYLQNEKPSTPRQLPALSGSVSATPMPTRNGALLCQSSTETLI 178
            ...:.|...| .|.|.|     ||..:|....||    .:|..:||.:|  :..:.....|:...
Zfish   163 SNSLTLPSAPTTSHFQMNKLPLRYAHSEVLRNPR----FAGLSAATQIP--SSPVYENPHTDDTD 221

  Fly   179 ELLKQHSGLKDCSDETVQHINAILQELYTRVRKQERNYKRGFILGGLYGLVECTSPRVLLAVARV 243
            ::....:.::....|:.:|   .||:...:.|:           ||...|               
Zfish   222 DVFLPSTSVERGRMESEKH---TLQQTLCKQRE-----------GGFVAL--------------- 257

  Fly   244 VLALRVTGSNLTGACKLIFKVARHEQHDALFHEHDVLELLIDGLGHASPLDEPEACIYAYGCIRF 308
                                    ||.:.:..:..|.:..::.:....|..              
Zfish   258 ------------------------EQSENVSWQSRVRKPSLEFVAGRRPSQ-------------- 284

  Fly   309 LTAS--SAQERDDALNRNWIGLETSGESQSLPIPALMPPALSAISTSLCPRKLTGQQTL---VSR 368
             |.|  |.:|:..:|.|    :|.....|.         |::.::....|.:|:.:.||   |:.
Zfish   285 -TGSLISMEEQSGSLGR----IEKLEVKQH---------AVTTLTKKGKPGELSAEMTLKEAVNL 335

  Fly   369 LARHGAVELMI-----LHLQMLNEAGATKR---LQG-PPLHTLYQLS------AAMRALADV--S 416
            |.:...:|..|     :..|..|...|.::   ||| |.|..|.|..      ||:.:|.::  .
Zfish   336 LTQDNNMETQIAAANFIQNQCFNSPDAKRKILHLQGIPKLLKLMQNDSEELQWAAVSSLRNIVFE 400

  Fly   417 QQQQRLQLQLQLACPHLIRAAEVSMGELEVQANVVRTLSVLSEDSDCCETLHNYAAR--IGLLLG 479
            ..:.:::::.....|.::|..:::. ::|.:..:...|..||......|.|...|.:  ...:|.
Zfish   401 NNENKMEVKDCEGLPVILRLLKINR-DIETRRQLTGLLWNLSSHDLLKEHLSREAVKPLTDSVLV 464

  Fly   480 PSCAGGGQWSERLLAV----------------LSRLG-------------------YMLGNILAK 509
            | |:|..:..:..|.:                ||..|                   |:.|.|   
Zfish   465 P-CSGISEGEDPKLELLADPDIFYNATGCLRNLSSAGPDGRKVMRDCEGLIECVIYYIRGTI--- 525

  Fly   510 HESARIQYFHNDVAMEYLLNVLEQLNERSPSSVAHLDAQIK----------------LIRVVANM 558
                 ..|..:|.|.|..:.:|..|:.|....|..:|:.:.                :|:...|.
Zfish   526 -----ADYKPDDKATENCVCILHNLSYRFDCEVPRVDSPVAQKPKQTHTETSNPGCFIIKTPKNS 585

  Fly   559 SVNPEVGAGLGNVRSLGA--------------VLLQLLSKTSEELTKKKSPEQQELLHATLGALH 609
            :.|.|.......:...|:              :.|.|::.::.:.||:          |::|.|.
Zfish   586 AENLEADEDYPALEENGSPHGVEWLWSAITVRMYLSLIAVSTNQHTKQ----------ASIGTLQ 640

  Fly   610 NL--CFYQDKQAAVQPLA--EGSLQ------------------SLIDDLS--------------A 638
            ||  |..:..||....:.  ||.|.                  ||:.::|              .
Zfish   641 NLTACSGEISQAIAHFIVQKEGGLSQVKKLLQEAEKEELRISVSLLKNISRYRELHADIVKQVLP 705

  Fly   639 SLAKVLGNCQTSVTK-----VELARVLGNLTRNEQARRC-FCAAGGLPLMVQQLTKQ------AA 691
            .|..:|.|...:|.:     |.:..:|.||::...:..| ....|.||.::...:|.      .|
Zfish   706 ELVAILPNSDRNVEQPIEITVTICHILINLSQASASNTCAIINQGALPKIISISSKDNGFGPTRA 770

  Fly   692 GQDYELRTCAIGVLVNLLGDGEQRGPFLQLRGAELLSLLLRGSLEQEDWFLANIVCQAL 750
            ||       |..||::.|           .|.:||.|...:....:.| |:.|...:|:
Zfish   771 GQ-------AACVLLHTL-----------WRHSELHSSFKKAGYRKTD-FINNRTVKAV 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32668NP_727502.1 armadillo repeat 571..611 CDD:293788 8/53 (15%)
armadillo repeat 619..665 CDD:293788 15/84 (18%)
armadillo repeat 670..708 CDD:293788 11/44 (25%)
pkp2NP_001106904.1 ARM 326..442 CDD:237987 24/116 (21%)
armadillo repeat 329..355 CDD:293788 5/25 (20%)
armadillo repeat 363..399 CDD:293788 10/35 (29%)
armadillo repeat 405..440 CDD:293788 4/35 (11%)
armadillo repeat 455..496 CDD:293788 5/41 (12%)
armadillo repeat 657..689 CDD:293788 5/31 (16%)
ARM 658..763 CDD:237987 19/104 (18%)
armadillo repeat 696..737 CDD:293788 8/40 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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