DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32668 and armc2

DIOPT Version :9

Sequence 1:NP_727502.1 Gene:CG32668 / 318147 FlyBaseID:FBgn0052668 Length:863 Species:Drosophila melanogaster
Sequence 2:XP_683582.4 Gene:armc2 / 555846 ZFINID:ZDB-GENE-041014-7 Length:812 Species:Danio rerio


Alignment Length:908 Identity:238/908 - (26%)
Similarity:369/908 - (40%) Gaps:269/908 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RRKTSAELISEAKMFLGESVNAVPLLATGGARLVSTRRPITPRESGRVLYGKV---ALAGRPPSA 132
            ||:||||::|||:..|               |.::|:||.||:|..|.|:|:.   |..||||||
Zfish    21 RRQTSAEIVSEARRSL---------------RSLATQRPFTPQEKNRQLFGESSSRARDGRPPSA 70

  Fly   133 FSM--RYLQ--NEKPSTPRQL------PALSGSV--------SATPMP------TRNGA------ 167
            ||:  |:.:  :.:|.:..:|      |.:|.|:        :|.|.|      ||.|:      
Zfish    71 FSLHARHFEAPDSRPGSGTRLSPLEHKPRVSVSLDEDGGDDEAAHPKPPVERGGTRTGSGGSRAR 135

  Fly   168 LL--------------------------------------------CQSSTETLIELLKQH---- 184
            ||                                            .:||:||  :|.||.    
Zfish   136 LLRATSVSKIPPMTPNAKNMSPEARIGGDQPDDGDNLHSADITEHKTKSSSET--DLHKQRRPQI 198

  Fly   185 -----SGLK----DCSDETV---QHINAILQE----------------------------LYTRV 209
                 ||.|    |..||:|   ..:..:|||                            |..|.
Zfish   199 DVSSPSGSKPDADDSEDESVFWNTKVLPVLQEFESFAGGDAVSDEIVGQLCNSCNGLHDALAERG 263

  Fly   210 RKQERNYKRGFILGGLYGLVECTSPRVLLAVARVVLALRVTGSNLTGACKLIFKVARHEQHDALF 274
            ....:..||..||..|:.|::..|.|:.|.:|:::|||.|:|:||...|||:||::|:..:||||
Zfish   264 MLGRQCKKRSGILRILFRLIDVGSDRLNLTLAKLILALNVSGNNLLNICKLVFKISRNANNDALF 328

  Fly   275 HEHDVLELLIDGLGHASPLDEPEACIYAYGCIRFLTASSAQERDDALNRNWIGLETSGESQSLPI 339
            ....:|:.|:..|.......:.||.:|..|.::.|:.:||..| ..|::.:||:......:.:..
Zfish   329 LNGSILDSLVSLLQCEDVWSKGEAVLYCVGSLKLLSGNSALSR-LLLDKGFIGVLMQLSKRLMHS 392

  Fly   340 PALMPPALSAISTSLCPRKLTGQ-QTLVSRLARHGAVELMILHLQMLNEAGATKRLQGPPLHTLY 403
            |       ||.|.::...:..|: |.:::.                               |.|.
Zfish   393 P-------SATSANVNTHRSDGEGQQIITG-------------------------------HILV 419

  Fly   404 QLSAAMRALADVSQQQQRLQLQLQLACPHLIRAAEVSMGELEVQANVVRTLSVLSEDSDCCETLH 468
            |::||:|.:||  |.:.|.......|...|....|....:|:|..||.|..|.||..::||..|.
Zfish   420 QVTAALRNIAD--QSESRPSFLSNKAFSTLCLILENHRNDLDVCINVARIFSKLSTYTECCHALA 482

  Fly   469 NYAARIGL---LLGPSCAGGGQWSERLLAVLSRLGYMLGNILAKHESARIQYFHNDVAMEYLLNV 530
            .......|   |||.        ..|...::.||.:.|||:.||...||.|.:..:..|:.||::
Zfish   483 ETPRCCSLFLELLGK--------HSRKQDLVVRLLFTLGNLTAKSTEAREQVYEEERGMDVLLDL 539

  Fly   531 LEQL-NERSPS----SVAHLDAQIKLIRVVANMSVNPEVGAGLGNVRSLGAVLLQLLSKTSEELT 590
            .:.. |..||.    |....|..:||||::||::::|.||..|    :...:.:|||   .|.|.
Zfish   540 FQAYQNTSSPPEQRLSPEREDVLVKLIRLLANLAIHPTVGTAL----AANTLCVQLL---LEVLE 597

  Fly   591 KKKSPEQQELLHATLGALHNLCFYQDKQAAVQPLAEGSLQSLIDDLSASLAKVLGNCQTSVTKVE 655
            .:...|.:||:...:..::||.||..:.:.::     |..:.|..|...|  :||:...:|  :|
Zfish   598 CRSVQESEELVINAVATINNLSFYPSQSSVIR-----SQHTHISQLLLKL--LLGSSMDAV--LE 653

  Fly   656 LARVLGNLTRNEQARRCFCAAGGLPLMVQQLTKQ-------AAGQDYELRTCAIGVLVNLLGDGE 713
            ..||.|||::.:..||         .::|...:|       :...|.....|  |||:||..|.:
Zfish   654 ATRVFGNLSQIKDVRR---------FVMQHKVEQFVITLLDSKSPDVCFSAC--GVLINLSADPD 707

  Fly   714 QRGPFLQLRGA--ELLSLLLRGSLEQEDWFLANIVCQALWNLLIDG---HCAANLCQSSNILDEV 773
            .|. .|...||  :|:..|  .....:||.||.:|||.|||..:||   |.           .|:
Zfish   708 NRA-MLSAEGAVQKLVDCL--RDFGPQDWHLAAVVCQTLWNCSLDGELQHA-----------QEL 758

  Fly   774 SDLLADYLDEDRLSPGDDDNDNDEDDPEREAEDLDASDTDPEAHDALWE-DFALVATDLLERI 835
            .::|..|.|                   |||....:.|...:..:|.|| .|..||..|.:|:
Zfish   759 LEILRLYTD-------------------REALQWPSEDGVRQVQEARWELLFLPVAERLRQRL 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32668NP_727502.1 armadillo repeat 571..611 CDD:293788 8/39 (21%)
armadillo repeat 619..665 CDD:293788 13/45 (29%)
armadillo repeat 670..708 CDD:293788 9/44 (20%)
armc2XP_683582.4 ARM 491..619 CDD:237987 41/142 (29%)
ARM 651..745 CDD:237987 33/109 (30%)
armadillo repeat 668..704 CDD:293788 11/46 (24%)
armadillo repeat 709..745 CDD:293788 14/38 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574378
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I3619
OMA 1 1.010 - - QHG52272
OrthoDB 1 1.010 - - D193557at33208
OrthoFinder 1 1.000 - - FOG0007922
OrthoInspector 1 1.000 - - oto40155
orthoMCL 1 0.900 - - OOG6_105703
Panther 1 1.100 - - LDO PTHR21356
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5874
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.810

Return to query results.
Submit another query.