DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32668 and armc2

DIOPT Version :9

Sequence 1:NP_727502.1 Gene:CG32668 / 318147 FlyBaseID:FBgn0052668 Length:863 Species:Drosophila melanogaster
Sequence 2:XP_002940593.2 Gene:armc2 / 100496180 XenbaseID:XB-GENE-958644 Length:844 Species:Xenopus tropicalis


Alignment Length:944 Identity:238/944 - (25%)
Similarity:362/944 - (38%) Gaps:307/944 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RKTSAELISEAKMFLGESVNAVPLLATGGARLVSTRRPITPRESGRVLYGKVALA---GRPPSAF 133
            :|||||:|:||:..|               |.:.|:||.||||..|.|:|..:..   .||||||
 Frog    20 KKTSAEIINEARNSL---------------RTLRTQRPFTPREDQRKLFGPTSSRTSDNRPPSAF 69

  Fly   134 SMRYLQNEKP-----------------------------------------------STPRQLPA 151
            |:.....|.|                                               |.|..|.|
 Frog    70 SLHSCSFESPDSRPVSGARLNPLPHKPKLHMTSAFDSHKDNVPCIPIPPMHPMQAGMSRPWLLRA 134

  Fly   152 LS---------------------------------GSVSATPMPTR------------------- 164
            .|                                 |:.|..|.|.:                   
 Frog   135 TSHGNLPENMVSPQEGTNQQHTSLALKGNLPEDFLGATSHYPEPRQISKIGIINQTSERPCERSS 199

  Fly   165 ------NGA----LLCQSSTETLIELLKQHSGLK----DCSDET----------VQHINAI---- 201
                  ||:    ..|.|.|.:  .||..:||.:    :..:||          ||.:|..    
 Frog   200 KHKHGPNGSESRPSSCPSRTSS--PLLGSNSGSEPEATEADEETRFWDEKICPIVQDLNTAHYEK 262

  Fly   202 ----LQELYTRVRK--QERNYK------RGFILGGLYGLVECTSPRVLLAVARVVLALRVTGSNL 254
                |..|..::.|  :|.|..      |..:|..|:.||:..|.::.:.:|:::|:|:|:|.||
 Frog   263 NLDDLCSLCVKLHKVLEEENMLGKRCKWRVVLLKTLFKLVDLGSDKLGIILAKLILSLKVSGRNL 327

  Fly   255 TGACKLIFKVARHEQHDALFHEHDVLELLIDGLGHASPLDEPEACIYAYGCIRFLTASSAQERDD 319
            ...||||||::|.|.:|.||...::::.|::.|.........||.:|..|.|:||:.::|     
 Frog   328 LNICKLIFKISRSENNDCLFQNDEIIDSLLEILQSEDVQTNSEAFLYCMGSIKFLSGNTA----- 387

  Fly   320 ALNRNWIGLETSGESQSLPIPALMPPALSAISTSLCPRKLTGQQTLVSRLARHGAVELMI-LHLQ 383
                                                         :::.|.|..|||::: |..:
 Frog   388 ---------------------------------------------ILNDLLRKQAVEILVKLMKE 407

  Fly   384 MLNEAGATKRLQGPPLHTLYQLSAAMRALADVSQQQQRLQLQLQLACPHLIRAAEVSMGELEVQA 448
            :...:...:.......|.|.|::|.:|.|||:|  |.|::.....|.|.|....|..:.:.::..
 Frog   408 VTRSSKFAETASANMSHLLVQVTATLRNLADLS--QSRVKFLASNALPELCTLLEHYVWDKDICT 470

  Fly   449 NVVRTLSVLSEDSDCCETLHNYAARIGLLLGPSCAGGGQWSERLLAVLS----------RLGYML 503
            ||.|.||.||..:|||..|            ..|.   |.....|:||:          |:.:.|
 Frog   471 NVSRILSKLSVYNDCCMAL------------ADCL---QCYSLFLSVLNNHPEKQDLVVRIVFTL 520

  Fly   504 GNILAKHESARIQYFHNDVAMEYLLNVLE---QLNERSPSSVA--------------HLDAQIKL 551
            ||:.||:...|..::....:::.:|.:|.   :|:.::..|:|              ..|..|||
 Frog   521 GNLTAKNNKTREMFYEEQGSIKTILRLLHVYYELDIKASQSIAIQQEKTMELKKPSETEDVLIKL 585

  Fly   552 IRVVANMSVNPEVGAGLGNVRSLGAVLLQLLSKTSEELTKKKSPEQQELLHATLGALHNLCFYQD 616
            ||.:||:.::|.|||.|...|...|:|:|:|.       .|...|.:||:..|...::||.||||
 Frog   586 IRALANLCIHPTVGAELAANRDCIALLMQILE-------YKSIDECEELVINTAATVNNLSFYQD 643

  Fly   617 KQAAVQPLAEGSLQSLIDDLSASLAKVLGNCQTSVTKVELARVLGNLTRNEQARRCFCAAGGLPL 681
            ..:.:      :.:.|  ::|..|.|:| .|......:|.|||.|||:|.:..|...........
 Frog   644 DTSVI------TKKKL--EISKLLFKLL-LCNNMDGILEAARVFGNLSRYQDVRSFMMEKDVYKF 699

  Fly   682 MVQQLTKQAAGQDYELRTCAIGVLVNLLGDGEQRGPFLQLRGA-ELLSLLLRGSLEQEDWFLANI 745
            .|..|.    .:..|:...|.|||:||..:...| ..||..|| |.:...|| .....||.||.:
 Frog   700 FVALLD----SKHQEVCFSACGVLINLTAEHSNR-VLLQEEGAVEKMIDCLR-DFASSDWQLAGL 758

  Fly   746 VCQALWNLLIDGHCAANL-----CQSSNILDEVSDLLADYLDEDRLSPGDDDNDNDEDDPEREAE 805
            :||||||.    |  .||     |.::.....:.:|||..|||....      ||      |..|
 Frog   759 LCQALWNF----H--ENLEYAEPCFAAQEAVSLLELLAYLLDEQTAL------DN------RLNE 805

  Fly   806 DLDASDTDPEAHDALWE-DFALVATDLLERIQNN 838
            :|      .|.|.|.|| :|..||..||||::.:
 Frog   806 EL------TEYHKACWEVEFKPVAFQLLERLKRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32668NP_727502.1 armadillo repeat 571..611 CDD:293788 10/39 (26%)
armadillo repeat 619..665 CDD:293788 13/45 (29%)
armadillo repeat 670..708 CDD:293788 8/37 (22%)
armc2XP_002940593.2 armadillo repeat 648..682 CDD:293788 12/42 (29%)
armadillo repeat 688..722 CDD:293788 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 211 1.000 Domainoid score I2741
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 211 1.000 Inparanoid score I3563
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D193557at33208
OrthoFinder 1 1.000 - - FOG0007922
OrthoInspector 1 1.000 - - oto103292
Panther 1 1.100 - - LDO PTHR21356
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5874
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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