DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mur11Da and Mmp23

DIOPT Version :9

Sequence 1:NP_727652.3 Gene:Mur11Da / 318139 FlyBaseID:FBgn0052644 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_446058.1 Gene:Mmp23 / 94339 RGDID:620201 Length:391 Species:Rattus norvegicus


Alignment Length:149 Identity:31/149 - (20%)
Similarity:50/149 - (33%) Gaps:61/149 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRAFAFTVLL-----TALTLSQGHGDDYLRFPDPG----NIP-----------RYNQRPCGPRV 45
            :|.|.||...|     ||...:||:.|    .||.|    .:|           ||...|...| 
  Rat    29 LLSALAFLEWLGSPTETAWNAAQGNVD----APDVGGSTPQVPSLLSMLVTRRRRYTLTPARLR- 88

  Fly    46 CGKSGHCYRSFESICDFNDYNL--------KMIFSGQE-------LFELTEPI----YCQPSPPR 91
                            ::.:||        :.:.|.:|       .|.:...:    :.:.:|.|
  Rat    89 ----------------WDHFNLTYRILSFPRNLLSPEETRRGLAAAFRMWSDVSPFSFREVAPER 137

  Fly    92 TKLVDVGYY-FNHRSLLVA 109
            ...:.:|:| .||...||:
  Rat   138 PSDLKIGFYPVNHTDCLVS 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mur11DaNP_727652.3 None
Mmp23NP_446058.1 Peptidase_M10 88..255 CDD:278824 14/86 (16%)
ZnMc_MMP 88..255 CDD:239805 14/86 (16%)
ShKT 256..290 CDD:214586
Ig 314..376 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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