DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mur11Da and prg4a

DIOPT Version :9

Sequence 1:NP_727652.3 Gene:Mur11Da / 318139 FlyBaseID:FBgn0052644 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_997918.2 Gene:prg4a / 336351 ZFINID:ZDB-GENE-030131-8295 Length:486 Species:Danio rerio


Alignment Length:69 Identity:20/69 - (28%)
Similarity:26/69 - (37%) Gaps:28/69 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TVLLTALTL---------SQGH-----GDDYLRFPDPGNIPR--YNQRPCGPRVCGKSGHCYRSF 56
            |||.:.|.|         :||.     |:.:.|    |:|..  ||        |...|.|.:.|
Zfish     5 TVLWSLLALLCTVLPSSAAQGSCVGRCGEQFSR----GHICNCDYN--------CFVHGECCKDF 57

  Fly    57 ESIC 60
            |.||
Zfish    58 EDIC 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mur11DaNP_727652.3 None
prg4aNP_997918.2 SO 23..65 CDD:197571 15/51 (29%)
Somatomedin_B 65..101 CDD:279385
HX 252..>372 CDD:295316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.