DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mur11Da and mmp20b

DIOPT Version :9

Sequence 1:NP_727652.3 Gene:Mur11Da / 318139 FlyBaseID:FBgn0052644 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_009290029.1 Gene:mmp20b / 100537445 ZFINID:ZDB-GENE-100603-3 Length:490 Species:Danio rerio


Alignment Length:191 Identity:36/191 - (18%)
Similarity:60/191 - (31%) Gaps:64/191 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRAFAFTVLLTALTLSQGHGDDYLRFPDPGNIPRYNQRPCGPRVCGKSGHCYRSFESI------- 59
            ||:::....:....:.:.|| |:..|..|.               |...|.:...|.|       
Zfish   157 LRSYSHQADIMVEFVGKEHG-DFFPFDGPD---------------GTLAHAFGPGEGIGGDVHFD 205

  Fly    60 ------CDFNDYNLKMIFSGQELFELTEPIYCQPSPPRTKLVDVGYYFNHRSLLVAQSQPSAYSS 118
                  ..:|.:||.::                          ..:.|.|...|.....|.:...
Zfish   206 EAEVWTAGYNGFNLYVV--------------------------AAHEFGHALGLKHSQLPESVMY 244

  Fly   119 PIPRPSFTQNPKNIEHYDAYPSSDSYGPVQDYELPYPV--WAFKRPQAPPRSP---PVSYR 174
            |..:...|.|..:.|  |....:..||| :| :.|||.  :::..|..|..|.   |||::
Zfish   245 PTYKRRKTHNLLSSE--DIININTLYGP-RD-KRPYPSSRFSWSNPSTPWYSGSYFPVSFK 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mur11DaNP_727652.3 None
mmp20bXP_009290029.1 PG_binding_1 45..95 CDD:279773
Peptidase_M10 115..269 CDD:278824 23/155 (15%)
ZnMc_MMP 115..269 CDD:239805 23/155 (15%)
HX 304..490 CDD:238046
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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