Sequence 1: | NP_572505.1 | Gene: | Lim1 / 31813 | FlyBaseID: | FBgn0026411 | Length: | 505 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_724428.1 | Gene: | ap / 35509 | FlyBaseID: | FBgn0267978 | Length: | 469 | Species: | Drosophila melanogaster |
Alignment Length: | 315 | Identity: | 103/315 - (32%) |
---|---|---|---|
Similarity: | 157/315 - (49%) | Gaps: | 43/315 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 TSQHNIGRSEPPVGVGDPCAGCNKPILDKFLLNVLERAWHASCVRCCECLQPL--TDKCFSRESK 71
Fly 72 LYCRNDFFRRYGT-KCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKF 135
Fly 136 ICKDDYLLGKAPSCGHNSLSDSLMGSA--SEDDDDDDPPHL--RATALGLGVLGP-----NG-PD 190
Fly 191 SA---GGP--LGTSDISVQSMSTDSKNTHDDSDQGSLDGDPDGRGDSQAENKSPDDANGSKRRGP 250
Fly 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRM 305 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lim1 | NP_572505.1 | LIM1_Lhx1_Lhx5 | 27..78 | CDD:188753 | 24/52 (46%) |
LIM2_Lhx1_Lhx5 | 86..141 | CDD:188761 | 21/54 (39%) | ||
COG5576 | 185..324 | CDD:227863 | 41/132 (31%) | ||
Homeobox | 250..303 | CDD:278475 | 24/52 (46%) | ||
ap | NP_724428.1 | LIM1_Lhx2_Lhx9 | 148..201 | CDD:188755 | 24/52 (46%) |
LIM2_Lhx2_Lhx9 | 206..264 | CDD:188763 | 23/58 (40%) | ||
Homeobox | 371..424 | CDD:395001 | 24/52 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45444989 | |
Domainoid | 1 | 1.000 | 47 | 0.796 | Domainoid score | I4515 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |