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Protein Alignment Lim1 and Hoxd10
DIOPT Version :9
Sequence 1: | NP_572505.1 |
Gene: | Lim1 / 31813 |
FlyBaseID: | FBgn0026411 |
Length: | 505 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006498852.1 |
Gene: | Hoxd10 / 15430 |
MGIID: | 96202 |
Length: | 410 |
Species: | Mus musculus |
Alignment Length: | 137 |
Identity: | 39/137 - (28%) |
Similarity: | 64/137 - (46%) |
Gaps: | 35/137 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 189 PDSAGG-PLGTS---DISVQSMSTDSKNTHDDSDQGSLDGDPDGRGDSQAEN----KSPDDANGS 245
|::.|| |...| ::||.|.....|.:.::. :.|:...| || |.
Mouse 289 PEAKGGLPEDRSCLAEVSVSSPEVQEKESKEEI-----------KSDTPTSNWLTAKS-----GR 337
Fly 246 KRRGPRTTIKAKQLEVLKT-AFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKR------SKER 303
|:|.|.| |.:.||:.|. .||. ..||..|.:::|...|..|.:::||||:| |:|.
Mouse 338 KKRCPYT--KHQTLELEKEFLFNM--YLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSREN 398
Fly 304 RMKQITS 310
|::::|:
Mouse 399 RIRELTA 405
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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