Sequence 1: | NP_572505.1 | Gene: | Lim1 / 31813 | FlyBaseID: | FBgn0026411 | Length: | 505 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032289.2 | Gene: | Hoxa10 / 15395 | MGIID: | 96171 | Length: | 416 | Species: | Mus musculus |
Alignment Length: | 290 | Identity: | 73/290 - (25%) |
---|---|---|---|
Similarity: | 103/290 - (35%) | Gaps: | 75/290 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 QPLTDKC-FS---RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPR----DKVFHLNCFTCC 115
Fly 116 ICRKQLSTGEQLYVLDDNKFICKDDYLLGKAPSCGHNSLSDSLMGS---ASEDDDDDDPPHLRAT 177
Fly 178 ALGLG---------VLGPNGPDS-----AGGPLGTSDISVQSMSTDSKNTHDDSDQGSLDGDPDG 228
Fly 229 RGDSQAENKSPDDAN------GSKRRGPRTTIKAKQLEVLKT-AFNQTPKPTRHIREQLAKETGL 286
Fly 287 PMRVIQVWFQNKRSK------ERRMKQITS 310 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lim1 | NP_572505.1 | LIM1_Lhx1_Lhx5 | 27..78 | CDD:188753 | 7/22 (32%) |
LIM2_Lhx1_Lhx5 | 86..141 | CDD:188761 | 13/58 (22%) | ||
COG5576 | 185..324 | CDD:227863 | 38/144 (26%) | ||
Homeobox | 250..303 | CDD:278475 | 19/59 (32%) | ||
Hoxa10 | NP_032289.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 40..60 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 81..167 | 3/7 (43%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 228..345 | 27/125 (22%) | |||
Homeobox | 345..398 | CDD:278475 | 20/56 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |