| Sequence 1: | NP_572505.1 | Gene: | Lim1 / 31813 | FlyBaseID: | FBgn0026411 | Length: | 505 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_620605.1 | Gene: | Lhx5 / 124451 | RGDID: | 71079 | Length: | 402 | Species: | Rattus norvegicus |
| Alignment Length: | 450 | Identity: | 197/450 - (43%) |
|---|---|---|---|
| Similarity: | 234/450 - (52%) | Gaps: | 138/450 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKCSGCGQ 91
Fly 92 GIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDYL---------LGKAP 147
Fly 148 SCGHNSLSDSLMGSASEDDDDDDPPHLRATALGLGVLGPNGPDSAGGPLGTSDISVQSMSTDSKN 212
Fly 213 THDDSDQGSLDGDPDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIR 277
Fly 278 EQLAKETGLPMRVIQVWFQNKRSKERRMKQITSMG--RPPFFGGARKMRGFPMNL---------- 330
Fly 331 ------------SPGGLDD----------------------GPGF------------PYFAADAK 349
Fly 350 F------------EFGYGGPFHPHDGPYFPGHPGGPMPFNAP---GGPMDHSGPIPMVNE 394 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lim1 | NP_572505.1 | LIM1_Lhx1_Lhx5 | 27..78 | CDD:188753 | 36/50 (72%) |
| LIM2_Lhx1_Lhx5 | 86..141 | CDD:188761 | 42/54 (78%) | ||
| COG5576 | 185..324 | CDD:227863 | 66/140 (47%) | ||
| Homeobox | 250..303 | CDD:278475 | 45/52 (87%) | ||
| Lhx5 | NP_620605.1 | LIM1_Lhx1_Lhx5 | 5..56 | CDD:188753 | 36/50 (72%) |
| LIM2_Lhx1_Lhx5 | 64..119 | CDD:188761 | 42/54 (78%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 124..186 | 23/115 (20%) | |||
| Homeobox | 183..237 | CDD:395001 | 46/53 (87%) | ||
| PHA03378 | <247..>392 | CDD:223065 | 31/146 (21%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 298..402 | 23/102 (23%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6228 |
| eggNOG | 1 | 0.900 | - | - | E33208_3B9QY | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 339 | 1.000 | Inparanoid score | I2295 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1070389at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002932 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44595 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105769 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24208 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1931 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.830 | |||||