DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0020 and nath-10

DIOPT Version :9

Sequence 1:NP_572503.1 Gene:l(1)G0020 / 31811 FlyBaseID:FBgn0027330 Length:1008 Species:Drosophila melanogaster
Sequence 2:NP_491574.1 Gene:nath-10 / 172182 WormBaseID:WBGene00018866 Length:1043 Species:Caenorhabditis elegans


Alignment Length:1053 Identity:500/1053 - (47%)
Similarity:702/1053 - (66%) Gaps:63/1053 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VKKKIDNRIRVMIENGVKLGHRTMFIVIGDKARDQVPILYDILTKSTVKARPTVLWCYKNKDEAI 66
            ::.|:|.|||..|||||..|||:||.|:||||||||||||.||:||||.|||.|||||| |:.:.
 Worm     1 MRTKLDGRIRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYK-KELSF 64

  Fly    67 SNHGKKRAKKIAVGKVDVN----EADLFDSFRVATTIHGRYYSETHAVLGRTYGVCVLQDFEALT 127
            |.|..|:|||:......::    :||.||.|..:|.|...||:||..:||.|:||.|||||||:|
 Worm    65 STHRAKKAKKMKKATTTISGSLPDADPFDVFISSTQIRYCYYNETEKILGNTFGVLVLQDFEAMT 129

  Fly   128 PNLLARTVETVEGGGLIILLLKTLQSLKQLYTMSMDVHKRFRTEAHQTVTCRFNERLILSLADCK 192
            |||||||:||:||||::|||:::::||:||||:|||||.|:|||||..:|.|||||.|||||.|.
 Worm   130 PNLLARTIETIEGGGMVILLMQSVRSLRQLYTISMDVHNRYRTEAHNEITARFNERFILSLASCS 194

  Fly   193 RCLVVNDDLTVLPLSSKTINVEPVNPAGAGR--SPNEASLKELKESLLTVQPAGALVNLCKTYDQ 255
            ..||::|.|.|||:||...|||.: ||...:  |.::|.|..|||::...:|.|.|::..:|..|
 Worm   195 SVLVLDDQLRVLPISSHIENVEAI-PASQKKIQSESDAELASLKEAMKETKPIGPLLSRARTACQ 258

  Fly   256 ANAVAQFIEALVDKQLKPPMSLTAARGRGKSAALGLSIAAAVAFGYVNIYVTSPHPENLITLFEF 320
            |.|:.:|::.:.:||.....||||.||||||||:|||:|.|:||||.||:||||.||||.|||||
 Worm   259 AKALLRFLDVITEKQSNVTCSLTAGRGRGKSAAVGLSLAGAIAFGYTNIFVTSPSPENLKTLFEF 323

  Fly   321 VLKGFDALEYQEHADYTIIRSTNADYKKAIIRINITRSSRQTIQYIAPSDTHLLNAADLLLIDEA 385
            |:||||||:||||.||.:|:|.|.::|..::|||:.|..:||||||:|:|...|...:|::||||
 Worm   324 VVKGFDALDYQEHTDYELIQSANPEFKNCLVRINVFREHKQTIQYISPTDVQKLGQCELIVIDEA 388

  Fly   386 AAIPLPLVKKMI-GPYLVFMASTINGYEGTGRSLSLKLISQLQK-------------DNNARP-- 434
            |||||||||::| |||:.|::|||||||||||||||||:.||::             .|..:.  
 Worm   389 AAIPLPLVKELISGPYISFLSSTINGYEGTGRSLSLKLLQQLRQQSAGGEAKEGKSASNKGKTLH 453

  Fly   435 PLKLEESIRYQENDDIEKWLINLLCLDASTVP-SISSGCPTPDACELYYVDRDALFSYHKAAEAF 498
            .:.:||||||:..|.|||||..||||||:... .:..|.|.|.|||||.|:||.|||:|.|:|||
 Worm   454 EMHMEESIRYKPGDKIEKWLNRLLCLDATNCQLKLECGTPPPAACELYIVNRDTLFSFHDASEAF 518

  Fly   499 LHRLVSIYVSSHYKNTPNDLQMMSDAPAHHLFCLLGPVQR-MDALPEILVVIQVALEGQISAQSI 562
            |.::::|:||:||||:||||||:||||||:||.|:.|:.: ...:||:|.|:||.|||::.:.:|
 Worm   519 LQQVMAIFVSAHYKNSPNDLQMLSDAPAHNLFVLMAPIDKSRKTIPEVLAVVQVCLEGRLDSDNI 583

  Fly   563 SDSLGRGKKAAGDLIPWNVAEQYGDRDFPKLCGVRIVRVATHPNYQRMGYGKRAIQLLKDYYARK 627
            .:.|..||:|||||:||.|::|:.|:.|..|||.||||||.||:||.||||.||:||::.||...
 Worm   584 QNGLESGKRAAGDLLPWTVSQQFMDKQFGTLCGGRIVRVAVHPDYQSMGYGGRAVQLIEQYYLGL 648

  Fly   628 HTNLEDGPVASKDAGKG-IEEVEE-EELSLLKEQIRPRSRIPTLLQRLHERVPEHVDYIGTSYGL 690
            .|:|::...|.....|. |::|:: ..:.||:|:|.||:.:|.|||||.||.||.:||:|.|:||
 Worm   649 ATSLDEEEKAPAPPSKTVIKQVKDGHTVELLEERIEPRADLPPLLQRLDERKPERLDYLGVSFGL 713

  Fly   691 TTELLKFWKNAGFVPVYLSQKSNELTAEHSCIML-----------HTPNATPWLGLYYQDFRRRV 744
            |..||||||...|||||:.|.||::|.||:||:|           ..|:|| ||.:|:::||||:
 Worm   714 TVPLLKFWKRNEFVPVYIRQNSNDITGEHTCIILKGLEHGGSDSDEEPSAT-WLPVYWREFRRRI 777

  Fly   745 LKLMGKTFREFETKLCLAL--LKNKSVDTEGSALKVLDKPMLDVYFLPHDLQRLESYARQQSEFR 807
            :.|:...|..|..::.|:|  ||||.|:.:...| |:::..|.::....||:|:..|.|...:..
 Worm   778 VNLLSFDFSSFPAQMALSLLQLKNKHVEKQMKRL-VIERSELAIHLSNTDLRRMSQYGRNMVDSH 841

  Fly   808 LIIDLLTDIAQLYFQGRI-DGLQLDLVQQGILLALGVQGKTVDALGLELNMPGNQLLAKFFDAMK 871
            :|.|:|..:|:|.|:.|: ..|:|.:.|..||||.|:|.|..:.:..||::|.||:.|....|::
 Worm   842 IITDILPIVAKLNFEQRLPQELKLAVTQSAILLARGLQHKHFEDISKELDLPMNQIFALLTKAIR 906

  Fly   872 RCNQCFRSVLEEHIEGGMLREADLSKGE-------ELQPLTLSLDKELDQTAQKLSKQQRKELKR 929
            |....|..|.|..:...:.:||:.|...       :..||. :|:.||:..|:::..:..::.|.
 Worm   907 RIGDWFDEVCETAVRENLDKEAEASAANKPTSSLPKAVPLA-NLEDELESAAKEIRARHDRDRKA 970

  Fly   930 LKAE---QLDEFQIKGTEEDWSKALETNGTGGGSGLLSVKSGVKRLDGPIETREDGDLAAPLSKK 991
            |.||   :|.:::|...|::.::|.|:......:.|:||||....:...|...:|     |.:|.
 Worm   971 LLAELGNELQKYEIIQDEKELAEAYESVNMKYANKLVSVKSKRTAIQAAIPDAKD-----PANKN 1030

  Fly   992 KKKNNPKQRRSQG 1004
            .||   |:|.|.|
 Worm  1031 AKK---KKRFSSG 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0020NP_572503.1 TmcA 21..882 CDD:224361 456/900 (51%)
DUF1726 104..198 CDD:285542 63/93 (68%)
Helicase_RecD 276..461 CDD:282921 120/200 (60%)
GNAT_acetyltr_2 501..726 CDD:290437 119/238 (50%)
tRNA_bind_2 744..863 CDD:290444 40/121 (33%)
nath-10NP_491574.1 TmcA 20..914 CDD:224361 455/897 (51%)
DUF1726 106..200 CDD:285542 63/93 (68%)
Helicase_RecD 279..480 CDD:282921 120/200 (60%)
GNAT_acetyltr_2 521..750 CDD:290437 119/228 (52%)
tRNA_bind_2 780..897 CDD:290444 39/117 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158527
Domainoid 1 1.000 249 1.000 Domainoid score I1168
eggNOG 1 0.900 - - E1_COG1444
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6785
Inparanoid 1 1.050 905 1.000 Inparanoid score I188
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54077
OrthoDB 1 1.010 - - D186208at33208
OrthoFinder 1 1.000 - - FOG0003402
OrthoInspector 1 1.000 - - oto20376
orthoMCL 1 0.900 - - OOG6_101162
Panther 1 1.100 - - LDO PTHR10925
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1773
SonicParanoid 1 1.000 - - X2298
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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