DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drd and oac-30

DIOPT Version :9

Sequence 1:NP_001033845.1 Gene:drd / 318102 FlyBaseID:FBgn0260006 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_493935.3 Gene:oac-30 / 185942 WormBaseID:WBGene00018573 Length:647 Species:Caenorhabditis elegans


Alignment Length:441 Identity:85/441 - (19%)
Similarity:160/441 - (36%) Gaps:138/441 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 DIEAVHGIRFLNAIMLIFSHKSMAMFFNPYNNRTAMSESLGQPWTVIGRAASLYTDPFLLFSGML 447
            ||:.:.||..::..:.   |....:|||.:                      |..|.|.:.||.|
 Worm     4 DIQCLRGIAIISVFLF---HLLPNLFFNGF----------------------LGVDIFFVISGYL 43

  Fly   448 TSYSLFGRLMKQQPIRLKNEYISRLMRIVPPLAALILFCTYV-----LP--LWGSGPQWNLVVGH 505
            .:.:|  ...|...||...|:..|..|.:.||..|::|...:     ||  ||.:..:::     
 Worm    44 MARNL--TKSKLTSIRDFLEFYYRRFRRILPLYYLLIFLIIIMVHLWLPYILWENSNRYS----- 101

  Fly   506 HADICKKNWWRNLLFIH---NYFGFSEM------CLTHTHHLGIDTELFAVAPLLILAL--WRWP 559
               |.......|.|.||   :||.....      ...|...|.::.:.:.:.|.:..||  .:..
 Worm   102 ---IASLFLMTNQLVIHDQADYFNSFRAESTAINAFLHLWSLSLEMQFYLLVPCIFFALQILKSD 163

  Fly   560 RRGLFALLLLCTVGTAARYYTTIVNQLS-NYIYFGTNIQRLFR-TADYMYSF-------PPHRST 615
            ...|.|.:|..|:|...  :..:::..: |:::.     ||:: :|.::..|       .|.:::
 Worm   164 YLKLLAAILTTTIGFVC--FALVLDSFAFNFMFL-----RLWQFSAGFVALFWSKIEQKLPEKNS 221

  Fly   616 VYIMGILLGYVLRKYQNARLSSL----QLRLGWLVATVCVLASLLGPAPMGDINYVYNSTHAAIY 676
                        .|.:.|:.:.:    |:.:..:|..||::..        |:|.:.......:.
 Worm   222 ------------EKSETAKPTWISEDDQVTVALVVLGVCIMPY--------DVNVLVIRPLVTVV 266

  Fly   677 AAFAPIAWCLFFSWIVFVSHNGYTNKL--TKLFAWRGFQVSTKLSYAIYLTQFPVFFFNVGRRRH 739
            .||             .:.....:|::  :|..::.|     .:||..||..:||          
 Worm   267 TAF-------------IIKLQSESNQILNSKTLSYIG-----DISYVTYLVHWPV---------- 303

  Fly   740 IHHYYNFVSIIL--DTNEF----ISIFLASVALTVLFDAPFQNL--KKLLI 782
                   :||.|  ..|.:    ::..|||:||..||:..:..|  |.|::
 Worm   304 -------ISIFLTSSVNSYVFCIVTTVLASIALHHLFEKQYLQLDFKPLIL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drdNP_001033845.1 NRF 169..>289 CDD:214781
OafA 371..791 CDD:224748 85/441 (19%)
Acyl_transf_3 384..770 CDD:280013 79/424 (19%)
oac-30NP_493935.3 OafA 1..340 CDD:224748 82/432 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.