DRSC/TRiP Functional Genomics Resources

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Protein Alignment drd and ndg-4

DIOPT Version :10

Sequence 1:NP_001033845.1 Gene:drd / 318102 FlyBaseID:FBgn0260006 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:687 Identity:163/687 - (23%)
Similarity:263/687 - (38%) Gaps:156/687 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 WALKMHDSSGKLNSGILNGNINQPGDFDQCLGIQQRMNQDQDAGQDQDGDSIIRGQYCLAYAQPV 235
            |.||..||.||..:||.:||....||::.|..:.              .|....||||....:  
 Worm   112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAALA--------------SDGSFDGQYCRIEME-- 160

  Fly   236 LPHNSKRLKSFFKLIQSHGPFKSEFNDPGHRVPRYSLINWGLCVPSGCSARDVEYSVAEYLGNQT 300
            :|...         ::|..|    ..||      .|:| .|:|.||.||..|:         ...
 Worm   161 VPDAG---------VESGCP----QTDP------LSII-LGVCFPSACSVADL---------TTV 196

  Fly   301 ASTGITFNVRVEPQMCQVRDQRPWDRNTTWAVRFFLLVLSVAVLSTIYDRSTKSQPKQNPWFTAF 365
            :|..:.:|::||   |:  .|..|    ::.....|::|.|.::....  :|......:...:.|
 Worm   197 SSIYLPYNLKVE---CE--SQNRW----SFVTVLLLIILMVWIVPQAV--ATFQTSSNDSILSCF 250

  Fly   366 SLDKNLRWLFSTSSAPGDIEAVHGIRFLNAIMLIFSHKSMAMFFN---PYNNRTAMS-ESLGQ-P 425
            |:..|.:..|||.....::..|||:.||    |.|:..| .|.:|   ||....|.: |.:.. |
 Worm   251 SIPDNAKRTFSTRRESPNLHVVHGLEFL----LFFTIVS-GMVYNFMLPYIENVAFAFEGVSSFP 310

  Fly   426 WTVIGRAASLYTDPFLLFSGMLTSYSLFGRLMKQQPIRLKNEYI-SRLMRIVPPLAALILFCTYV 489
            ..::.. .|...|..|..|...|:|.|||.::   .:|...:|| .||.|..|.....:||...:
 Worm   311 MHIVNN-YSYQIDGLLALSAFYTTYLLFGNIL---TLRSAFDYILMRLFRFWPAYIVCVLFMYVI 371

  Fly   490 LPLWGSGPQWNLVVGHHADI---CKKNWWRNLLFIHNYFGFSEMCLTHTHHLGIDTELFAVAPLL 551
            .|...|||.|     .|.|.   |...||:|:|||:|:|..::.|:...:.:.::.:.:|:...:
 Worm   372 FPGVSSGPMW-----IHTDTVNRCGSGWWKNILFINNWFNVTDTCVDIGYVISMEAQYYAILIFV 431

  Fly   552 ILALWRWPRRGLFALLLLCTVGTAARYYTTIVNQLSNYIYFGTNIQRLFRTADYMYSFPP----- 611
            |....::|                      ::.||..|..||::|...|..| |....||     
 Worm   432 IFLSSKYP----------------------LLTQLFAYTVFGSSIIFSFVRA-YSQELPPAPMLT 473

  Fly   612 ---------------------HRSTVYIMGILLGY-VLRKYQNARLSSLQLRLGWLVATVCV--- 651
                                 .||:.|.:|.:.|. ........|.|.|...:..|:|.:|:   
 Worm   474 LEPVPLTKVYAVFDQLLLSLFARSSNYCLGFIFGIGCATASDELRESGLSYCMHKLLAIICIAFA 538

  Fly   652 LASLLGPAPMGDINYVYN-STHAAIYAAFAPIAWCLFFSWIVFVSHNGYTNK--LTKLFAWRGFQ 713
            :...:|..|.....:|.| ....|.|||.....|.......|::.|:|..:|  |..|..||.|.
 Worm   539 VVPFVGAFPYSAYAWVSNFEIMNASYAALHRPMWSFALLSFVYLCHHGAFSKEWLNALLEWRVFA 603

  Fly   714 VSTKLSYAIYLTQFPV---FFFNVGRRRHIHHYYNFVSIILDTNEFISIFLASVALTVLFDAPFQ 775
            ..:|:::...:...|:   ||.::.:..:..|:....:.|            |.||...|.|.|.
 Worm   604 PLSKVTWIALVVAEPIILYFFSSLNKPAYATHWSTMYTAI------------STALLAYFVAMFL 656

  Fly   776 NLKKLLIKRPTAAKVVKDSKAKAAESQDATTTTLASQ 812
            :   :.:.||....:..:.|.:.|:   |.|...|:|
 Worm   657 D---IFVTRPIRYLIYPEQKHRYAQ---AHTQDQAAQ 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drdNP_001033845.1 NRF 154..292 CDD:466307 33/120 (28%)
OafA 377..788 CDD:441440 108/455 (24%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 39/152 (26%)
Acyl_transf_3 334..649 CDD:473885 82/357 (23%)

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