DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1785 and rrp16

DIOPT Version :9

Sequence 1:NP_572502.1 Gene:CG1785 / 31810 FlyBaseID:FBgn0030061 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_594732.1 Gene:rrp16 / 2541680 PomBaseID:SPAC22F8.09 Length:419 Species:Schizosaccharomyces pombe


Alignment Length:469 Identity:120/469 - (25%)
Similarity:216/469 - (46%) Gaps:82/469 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KRISKKNKSAWRKT-DIQDVEQFLEDQRQEE-RVGTFADKQDEDLFVVDSSLPKTKATVLSVKQK 73
            |:.|:|||.||||. |::|:|..||..|.|| :.|....|.::.|||:| :|...:   ::.:.:
pombe    13 KQSSRKNKRAWRKNIDLEDIESGLEQTRDEEIKGGNVEHKPNDALFVID-TLGDDR---IAKRSR 73

  Fly    74 RKLNAKKPMRSYQALENTSKVQDPIA--KRNHVRQKKNGRNIELEVCNPTKPRHRQANSDRAQYY 136
            :|:   ||::..|.|||.|.::...:  ..|.....|.|:...          .::.|..:|..|
pombe    74 KKI---KPLKVDQILENKSSIEKVHSHLTNNSTESNKKGKIFS----------RKELNRLQALVY 125

  Fly   137 -----VKLEQRLADKKNKKLDVEK-DIWQEVDFRDEIPGLKDEKGWISRELALHTAGNIGKKVVK 195
                 :......::.||.|...|. |:| |.:....||        :.|...|.          |
pombe   126 KNKDGLTATSAASELKNTKQPKESYDVW-ETNPTVTIP--------VKRPSTLS----------K 171

  Fly   196 THASLHHKTTKAKKFELPHPGMSYNPAPEDHQALIDQVVEREEGIIKKEQHLKRVTTSMFSKVTP 260
            ...||.....|.....:..|||||||.......|:|.....|   :||||  ||::..       
pombe   172 LPESLTENNAKVPNVVIADPGMSYNPDAAAWMKLLDTKGSEE---LKKEQ--KRISEL------- 224

  Fly   261 EERDRRRLNEMSQGMDEEEGSELDEDVQTNGKKKEDDDEKPYHTINAPV---ENKKKSKQARRNE 322
            ||::|     :.:...|::|...|:||   ....:.||:..:.....|:   :||:|:: ::||:
pombe   225 EEKER-----IQKKAFEDKGLVSDQDV---NHSIDSDDQSEHEQAETPIPSSKNKRKTR-SQRNK 280

  Fly   323 LKQKELARQTELKRKLKQQTADLIR----IKSIRHELDDEEEDLNDLKKRRKQRAEKAKFEPKRL 383
            ::|:   |:.||:...:::..:|:|    ..:|..:|..:::......|.......:.|.:.|:.
pombe   281 IRQR---REEELRLLEQKKNEELLRTIDKAPAISKKLQQKDKAEKFSNKAVSSSTTEIKLKKKKF 342

  Fly   384 GRHKFEEPDLDVNLPEDIAGNLRNVKTESSLLKDRFHTLQRNNMLPTTKLVSRK---KSKVKRFE 445
            |:|:.....|::.|.:::..:||.:|.|.:|..||:.:||:..|:|.:..|.:|   ::|:|  |
pombe   343 GKHRLPNNPLEIKLGDELTSSLRELKPEGNLFADRYLSLQQRAMVPPSLPVLKKSKYRAKIK--E 405

  Fly   446 RNSHKEPGVSYNDL 459
            :.|||:..:..|.:
pombe   406 KYSHKDFHLQKNSI 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1785NP_572502.1 Nop53 20..422 CDD:285064 102/418 (24%)
rrp16NP_594732.1 Nop53 18..381 CDD:285064 105/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 101 1.000 Domainoid score I1809
eggNOG 1 0.900 - - E1_KOG2823
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44130
Inparanoid 1 1.050 118 1.000 Inparanoid score I1525
OMA 1 1.010 - - QHG59688
OrthoFinder 1 1.000 - - FOG0005195
OrthoInspector 1 1.000 - - oto102017
orthoMCL 1 0.900 - - OOG6_103655
Panther 1 1.100 - - LDO PTHR14211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1899
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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