DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA2B1 and hnrnpa3

DIOPT Version :10

Sequence 1:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens
Sequence 2:NP_001315077.1 Gene:hnrnpa3 / 751729 ZFINID:ZDB-GENE-060224-1 Length:340 Species:Danio rerio


Alignment Length:361 Identity:248/361 - (68%)
Similarity:275/361 - (76%) Gaps:43/361 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    12 RKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
            |..:|.||.||||||||||||||:|||.::||||||||||||||||:||||||||||:||::|||
Zfish     4 RDSKEPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVD 68

Human    77 AAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
            |||.||||.:|||||||||||:||:|.|||||:||||:|||||||||||:|:|:|||.||||:||
Zfish    69 AAMTARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETI 133

Human   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEV--QSSRSGRG 204
            :|:.:|.:||||||.||||||||.|||||.|||||||.||.||||||.:||||..  |..|.|.|
Zfish   134 DIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALPKQEMQSSSNQRYRGGGG 198

Human   205 GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSP-GYGGGRGG 268
            |||     .|.|||||.|          |||.|||.||||||:     |||:||.| ||||||||
Zfish   199 GNF-----TGRGGNFGRG----------GYGGGRGGGDGYNGF-----GGNYGGGPGGYGGGRGG 243

Human   269 YGGGGPGYGNQGGGYG-GGYDNYG-----GGNY----------GSGNYNDFGNYNQQPSNYGPMK 317
            | ||||||||||||.| ||:|||.     |||:          |.|||||||||..|.||:||||
Zfish   244 Y-GGGPGYGNQGGGGGFGGFDNYNDRGNFGGNFGGGGGSSGGGGGGNYNDFGNYGGQQSNFGPMK 307

Human   318 SGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY 353
            ..|||| || .||||||.||.||.||.||||.| ||
Zfish   308 GNNFGG-RN-SGPYGGGGYGSGGGGGGGGYGSR-RY 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15 1/2 (50%)
RRM1_hnRNPA2B1 19..99 CDD:410155 67/79 (85%)
RRM2_hnRNPA2B1 112..191 CDD:409995 60/78 (77%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 104/178 (58%)
HnRNPA1 302..326 CDD:463312 16/23 (70%)
Nuclear targeting sequence. /evidence=ECO:0000250 308..347 26/38 (68%)
hnrnpa3NP_001315077.1 RRM1_hnRNPA_like 14..91 CDD:409992 65/76 (86%)
RRM2_hnRNPA3 104..183 CDD:409996 60/78 (77%)
HnRNPA1 292..>315 CDD:463312 16/23 (70%)

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