DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA2B1 and trv

DIOPT Version :10

Sequence 1:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens
Sequence 2:NP_001163754.3 Gene:trv / 43362 FlyBaseID:FBgn0085391 Length:651 Species:Drosophila melanogaster


Alignment Length:321 Identity:72/321 - (22%)
Similarity:124/321 - (38%) Gaps:100/321 - (31%)


- Green bases have known domain annotations that are detailed below.


Human     2 EKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 66
            ::.:|.:|...|     ||. :|:|.||.|...:.||..:..:|:::||.|:|||.:.:|:|:||
  Fly   299 DEEMEYMPPLHK-----QFH-IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGF 357

Human    67 VTFSSMAEVDAAMAARPHSIDGRVV---------EPKRAVAREESGKP-----------GAHVTV 111
            |:|...:|.::|:.|    ::|:.:         ..::..|.:|:.||           .::.||
  Fly   358 VSFIKKSEAESAITA----MNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTV 418

Human   112 KKLFVGGIKE---DTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
               :|||:..   ...|..|:..|..||.|..|.:..|      :|:.||.|...:...      
  Fly   419 ---YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAAT------ 468

Human   174 YHTING-HNAEVR------------------KALSRQEMQEVQSSRSGRGGNFGFGDSRGGGGN- 218
             |.|.| ||.|:.                  :.::.|.:....::.:|.....|...:....|. 
  Fly   469 -HAIVGVHNTEINAQPVKCSWGKESGDPNNAQTIATQALNSAAAAAAGFPYGVGAAAAAAAYGQQ 532

Human   219 -------FGPGP----------------------GSNFRGGSDGYGSGR--GFGDGYNGYG 248
                   :.|.|                      .:.|..|..||..|:  |:..||.|.|
  Fly   533 LAATGCWYSPTPTYPASSATAAAVTPAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMGMG 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15 2/5 (40%)
RRM1_hnRNPA2B1 19..99 CDD:410155 26/88 (30%)
RRM2_hnRNPA2B1 112..191 CDD:409995 21/100 (21%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 15/88 (17%)
HnRNPA1 302..326 CDD:463312
Nuclear targeting sequence. /evidence=ECO:0000250 308..347
trvNP_001163754.3 RRM2_TIA1_like 313..387 CDD:409789 24/78 (31%)
RRM3_TIA1_like 416..489 CDD:409790 23/88 (26%)
Blue background indicates that the domain is not in the aligned region.

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