DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA2B1 and Rox8

DIOPT Version :10

Sequence 1:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens
Sequence 2:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster


Alignment Length:306 Identity:65/306 - (21%)
Similarity:109/306 - (35%) Gaps:96/306 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
            ::.|.:.|::|.|....:|:.|...:...|.:..|.::|:|.:.   .:.|:.:|:......|:.
  Fly     2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND---PYAFIEYSNYQAATTALT 63

Human    81 ARPHSIDGRVV---EPKRAVAREESGKPGAHVTV-KKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
            |    ::.|:.   |.|...|.....:|...::. ..:|||.:..:.|...||:.|..:|:|...
  Fly    64 A----MNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNC 124

Human   142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGN 206
            .|:.|..:.|.:|:.||:|                       |:||.:...:|.:.....|    
  Fly   125 RIVRDPHTMKSKGYAFVSF-----------------------VKKAEAENAIQAMNGQWIG---- 162

Human   207 FGFGDSRGGGGNFG----PGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRG 267
                 ||....|:.    |.|                                  ..|..|||:|
  Fly   163 -----SRSIRTNWSTRKLPPP----------------------------------REPSKGGGQG 188

Human   268 GYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQ-QPSN 312
            |..|||||.|:              |..||..:.....||| .|:|
  Fly   189 GGMGGGPGNGS--------------GVKGSQRHTFEEVYNQSSPTN 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15
RRM1_hnRNPA2B1 19..99 CDD:410155 17/82 (21%)
RRM2_hnRNPA2B1 112..191 CDD:409995 19/78 (24%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 27/125 (22%)
HnRNPA1 302..326 CDD:463312 5/12 (42%)
Nuclear targeting sequence. /evidence=ECO:0000250 308..347 3/6 (50%)
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 16/77 (21%)
RRM2_TIA1_like 96..170 CDD:409789 23/105 (22%)
RRM_SF 221..292 CDD:473069 65/306 (21%)
Blue background indicates that the domain is not in the aligned region.

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