DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNRNPA2B1 and Hrb27C

DIOPT Version :10

Sequence 1:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens
Sequence 2:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster


Alignment Length:394 Identity:128/394 - (32%)
Similarity:188/394 - (47%) Gaps:79/394 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
            |:::..|||:||||:|||:|:|..|:.::|.:.|||||::..|.||||||||||:....|:..:.
  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66

Human    81 ARPHSIDGRVVEPKRAVAR--EESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEI 143
            ..||::|||.::||....|  ::..|.|.:    |:|:||:..:..|..||.:|..|||:..:.|
  Fly    67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY----KVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127

Human   144 ITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFG 208
            :.|::..|.|||||::|::...|:.:..::|..:||...|::||..|.......|:.|..||.:|
  Fly   128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYG 192

Human   209 -FGDS--------------RGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGG 258
             .|:.              :|..|..| ||..|...|:.      ....||.|:|..|....:  
  Fly   193 KLGNECSHWGPHHAPINMMQGQNGQMG-GPPLNMPIGAP------NMMPGYQGWGTSPQQQQY-- 248

Human   259 SPGYG-GGRGGYGGGG---------PGYGNQGG-----GYGGGYDNYG-------GGNYGSGNYN 301
              ||| .|.|.|.|.|         |.:.|..|     || ||||.|.       .|..|.|::|
  Fly   249 --GYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGY-GGYDMYNSTSTGAPSGPSGGGSWN 310

Human   302 DFGNYNQQPSNYGPMKSGNFG----------------GSRNMGGPYGG-GNYGPGGSGGSGG--- 346
               ::|..|::.||..:...|                |..:..||.|| ...|||.|....|   
  Fly   311 ---SWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEY 372

Human   347 -YGG 349
             |||
  Fly   373 DYGG 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15
RRM1_hnRNPA2B1 19..99 CDD:410155 38/79 (48%)
RRM2_hnRNPA2B1 112..191 CDD:409995 27/78 (35%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 58/215 (27%)
HnRNPA1 302..326 CDD:463312 6/39 (15%)
Nuclear targeting sequence. /evidence=ECO:0000250 308..347 14/59 (24%)
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 35/70 (50%)
RRM2_DAZAP1 94..173 CDD:409765 28/82 (34%)
Blue background indicates that the domain is not in the aligned region.

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