DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sordd2 and Rnf5

DIOPT Version :10

Sequence 1:NP_727898.2 Gene:sordd2 / 318098 FlyBaseID:FBgn0052581 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_062276.1 Gene:Rnf5 / 54197 MGIID:1860076 Length:180 Species:Mus musculus


Alignment Length:176 Identity:90/176 - (51%)
Similarity:113/176 - (64%) Gaps:9/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ANEKD-----KEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCK 166
            |.|:|     ..:|.....:.:||||||:||::||||:||||:|||||||||.|||:|:.|||||
Mouse     4 AEEEDGGPEGPNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCK 68

  Fly   167 AAVDKDKVIPLYGRNSTHQEDPRNKVPPRPAGQRTEPDPVPGFPGFGFGDGFHMSFGIGAFPFGF 231
            |.:.::||:|||||.|...:|||.|.||||.|||..|:...||..||...|||.|||:|||||||
Mouse    69 AGISREKVVPLYGRGSQKPQDPRLKTPPRPQGQRPAPESRGGFQPFGDAGGFHFSFGVGAFPFGF 133

  Fly   232 ITSRLNFFEP-RPPA--DIRRLHEDEPWALSKLFWHFVVFVIYGLL 274
            .|:..|..|| |..|  |:.:.|....|. ..||....:|..:.||
Mouse   134 FTTVFNAHEPFRRGAGVDLGQGHPASSWQ-DSLFLFLAIFFFFWLL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sordd2NP_727898.2 RING-HC_RNF185 123..179 CDD:438402 39/55 (71%)
Rnf5NP_062276.1 RING_Ubox 25..81 CDD:473075 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..110 17/30 (57%)

Return to query results.
Submit another query.