DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc14A and Vit

DIOPT Version :9

Sequence 1:NP_727928.3 Gene:Muc14A / 318097 FlyBaseID:FBgn0052580 Length:16223 Species:Drosophila melanogaster
Sequence 2:NP_083089.1 Gene:Vit / 74199 MGIID:1921449 Length:650 Species:Mus musculus


Alignment Length:661 Identity:122/661 - (18%)
Similarity:206/661 - (31%) Gaps:198/661 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly 15368 TQIITEKSTTNNLSVHSNI-DKS--TISTQPYFDTDTTKYSTSVGVLSEESSKLTKQNITEEITT 15429
            |.:....|:....::||.: |.|  .|..:........|.|.|.||.|....:..:..|..|   
Mouse    76 TGVYASYSSVCGAAIHSGVLDNSGGKILVRKVAGQSGYKGSYSNGVQSLSLPRWRESFIVAE--- 137

  Fly 15430 NILSLP-SNIATSTTLTQPHSDT------DKTEAIQNQTTAGHTTQDSSVIGLLSKEPTQTLTFS 15487
               |.| ..:|..:|||...|.|      :.|:|.:..:..|.|.|           |. |||.:
Mouse   138 ---SKPQKGVAYPSTLTYSSSKTAAAKAGETTKAYEKPSIPGTTIQ-----------PV-TLTQA 187

  Fly 15488 KLSPTQIITEKSTSNNLSVHSNIDNSTISTQPYFDTDTTKYSTSVGVLSEE-------------- 15538
            :.:|...:|.:|||...:  :::.||. ..||            ||..|:|              
Mouse   188 QATPVAEVTHRSTSKPFA--ASVTNSP-RPQP------------VGHRSQEMEEVDGWKPGPVLL 237

  Fly 15539 -SSKLTKQNITEEITTNILSLPSNIATSTTLTQ--PHSDTDKTEAIQNQTTAGHTTQD------S 15594
             |..:.|    ||::|.         :|..:.|  |:...|.:..|...|:.|.....      :
Mouse   238 DSGFVPK----EELSTQ---------SSEPVPQGDPNCKIDLSFLIDGSTSIGKRRFRIQKQFLA 289

  Fly 15595 SVIGLLSKEPTQTLTFSKLSPTQIITEKSTTNNLSVHSNIDNSTISTQPYFDTDTTKYSTSVGVL 15659
            .|:..|...|...|    :...|.....:|..||..|.|                          
Mouse   290 DVVQALDIGPAGPL----VGVVQYGDNPATQFNLKTHMN-------------------------- 324

  Fly 15660 SEESSKLTKQNITEEITTNILSLPSNIATSTTLTQPHSD----------------TDKTETIQNQ 15708
             .:..|...:.||:....:.:....:..|.|..::.:.:                |||.|.:...
Mouse   325 -SQDLKTAIEKITQRGGLSNVGRAISFVTKTFFSKANGNRGGAPNVAVVMVDGWPTDKVEEVSRV 388

  Fly 15709 -----------TTAGHTTQDSSVI---GLLSKEPTQTLTFSKLSPTQIITEKSTSNNLSVHSNID 15759
                       |..|...:|...:   |..||...:|..|...         :..:.||:|..: 
Mouse   389 ARESGINVFFITVEGAAERDIQHVVEPGFASKAVCRTNGFYSF---------NVQSWLSLHKTV- 443

  Fly 15760 NSTISTQPYF----DTD------TTKYSTSVGVLSEASSKLTKQNITEKSTTNILSLPSNIATST 15814
                  ||..    |||      |...|..:|.:.:.||.:...|.     ..:|...:|::...
Mouse   444 ------QPLVKRVCDTDRLACSKTCLNSADIGFVIDGSSSMGTSNF-----RTVLQFVANLSKEF 497

  Fly 15815 TLTQPHFYTDKTETTGNQTSTEHTSKYSTTVEFLS----------------KEQTSIIPTFSKLE 15863
            .::.........:.|..|.......||::..:.||                ..|.::...|.|.:
Mouse   498 EISDTDTRVGAVQYTYEQRLEFGFDKYNSKADILSAIRRVGYWSGGTSTGAAIQYALEQLFKKSK 562

  Fly 15864 PTEH-----ISNNKKFTSNGTTEYVISQSNNKTYSDSQLISTTENLILTASSQPTDVNVWKEIDK 15923
            |.:.     |::.:.:...........|....||:.....:..:.|.:.|:....|.:.:     
Mouse   563 PNKRKVMIIITDGRSYDDVRIPAMAAYQKGVITYAIGIAWAAQDELEVMATHPAKDHSFF----- 622

  Fly 15924 RLDDLQNKYTI 15934
             :||..|.|.|
Mouse   623 -VDDFDNLYKI 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc14ANP_727928.3 PRK14949 <11377..11776 CDD:237863
PRK08581 11922..>12215 CDD:236304
PRK14949 <13679..14114 CDD:237863
PRK14949 <14663..15055 CDD:237863
VitNP_083089.1 LCCL 44..133 CDD:281766 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..226 11/42 (26%)
vWFA 265..428 CDD:294047 30/193 (16%)
vWA_collagen 466..626 CDD:238749 24/170 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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